| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031918 |
Definition |
Salmonella phage 64795_sal3, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
45342 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
74 |
%GC |
45.59 |
Number of singletons |
4 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009322209.1 | NC_031918_p12 | hypothetical protein | phrog_312 | Rz-like spanin | lysis | 1 | 6892 | 7383 |
| YP_009322262.1 | NC_031918_p65 | hypothetical protein | phrog_29997 | unknown function | unknown function | -1 | 40120 | 40530 |
| YP_009322205.1 | NC_031918_p8 | hypothetical protein | phrog_21280 | unknown function | unknown function | -1 | 5543 | 5704 |
| YP_009322249.1 | NC_031918_p52 | hypothetical protein | phrog_384 | virion structural protein | head and packaging | 1 | 27290 | 27772 |
| YP_009322238.1 | NC_031918_p41 | hypothetical protein | phrog_797 | unknown function | unknown function | 1 | 19059 | 19406 |
| YP_009322236.1 | NC_031918_p39 | hypothetical protein | phrog_13738 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 18411 | 18695 |
| YP_009322218.1 | NC_031918_p21 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9473 | 10192 |
| YP_009322210.1 | NC_031918_p13 | hypothetical protein | phrog_1312 | unknown function | unknown function | -1 | 7396 | 7491 |
| YP_009322254.1 | NC_031918_p57 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 33477 | 33926 |
| YP_009322250.1 | NC_031918_p53 | hypothetical protein | phrog_396 | minor tail protein | tail | 1 | 27772 | 28242 |
| YP_009322258.1 | NC_031918_p61 | hypothetical protein | phrog_824 | unknown function | unknown function | -1 | 36095 | 36511 |
| YP_009322271.1 | NC_031918_p74 | hypothetical protein | phrog_9747 | unknown function | unknown function | 1 | 44725 | 45141 |
| YP_009322265.1 | NC_031918_p68 | hypothetical protein | phrog_28399 | unknown function | unknown function | -1 | 42370 | 42591 |
| YP_009322264.1 | NC_031918_p67 | hypothetical protein | phrog_33132 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 40883 | 42370 |
| YP_009322215.1 | NC_031918_p18 | hypothetical protein | phrog_27614 | unknown function | unknown function | 1 | 8798 | 9031 |
| YP_009322230.1 | NC_031918_p33 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16018 | 16170 |
| YP_009322201.1 | NC_031918_p4 | hypothetical protein | phrog_758 | head morphogenesis | head and packaging | 1 | 2427 | 3380 |
| YP_009322234.1 | NC_031918_p37 | hypothetical protein | phrog_14587 | anti-restriction protein | moron, auxiliary metabolic gene and host takeover | -1 | 17441 | 17719 |
| YP_009322216.1 | NC_031918_p19 | hypothetical protein | phrog_15697 | unknown function | unknown function | 1 | 9042 | 9236 |
| YP_009322208.1 | NC_031918_p11 | hypothetical protein | phrog_13249 | holin | lysis | 1 | 6521 | 6751 |
| YP_009322232.1 | NC_031918_p35 | hypothetical protein | phrog_2201 | unknown function | unknown function | -1 | 17030 | 17245 |
| YP_009322259.1 | NC_031918_p62 | DNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 36498 | 38420 |
| YP_009322268.1 | NC_031918_p71 | hypothetical protein | phrog_10786 | unknown function | unknown function | 1 | 43561 | 43794 |
| YP_009322227.1 | NC_031918_p30 | hypothetical protein | phrog_2138 | unknown function | unknown function | 1 | 15081 | 15278 |
| YP_009322200.1 | NC_031918_p3 | hypothetical protein | phrog_146 | portal protein | head and packaging | 1 | 1043 | 2446 |
| YP_009322233.1 | NC_031918_p36 | hypothetical protein | phrog_8760 | unknown function | unknown function | -1 | 17247 | 17438 |
| YP_009322247.1 | NC_031918_p50 | tape measure protein | phrog_1538 | tail length tape measure protein | tail | 1 | 23596 | 26082 |
| YP_009322246.1 | NC_031918_p49 | hypothetical protein | phrog_791 | unknown function | unknown function | 1 | 22880 | 23596 |
| YP_009322206.1 | NC_031918_p9 | hypothetical protein | phrog_10457 | endolysin | lysis | 1 | 5792 | 6070 |
| YP_009322220.1 | NC_031918_p23 | hypothetical protein | phrog_33875 | unknown function | unknown function | 1 | 10343 | 10537 |
| YP_009322261.1 | NC_031918_p64 | DNA primase/helicase | phrog_510 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 39099 | 40085 |
| YP_009322267.1 | NC_031918_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43343 | 43498 |
| YP_009322252.1 | NC_031918_p55 | hypothetical protein | phrog_469 | tail protein | tail | 1 | 28749 | 31100 |
| YP_009322235.1 | NC_031918_p38 | hypothetical protein | phrog_14688 | lipoprotein | other | 1 | 17938 | 18207 |
| YP_009322229.1 | NC_031918_p32 | hypothetical protein | phrog_4439 | unknown function | unknown function | -1 | 15845 | 16018 |
| YP_009322214.1 | NC_031918_p17 | hypothetical protein | phrog_14963 | unknown function | unknown function | -1 | 8534 | 8704 |
| YP_009322263.1 | NC_031918_p66 | hypothetical protein | phrog_38095 | unknown function | unknown function | -1 | 40527 | 40886 |
| YP_009322243.1 | NC_031918_p46 | hypothetical protein | phrog_924 | unknown function | unknown function | -1 | 22151 | 22330 |
| YP_009322260.1 | NC_031918_p63 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 38424 | 38978 |
| YP_009322269.1 | NC_031918_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43791 | 44072 |
| YP_009322239.1 | NC_031918_p42 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 19406 | 19804 |
| YP_009322256.1 | NC_031918_p59 | hypothetical protein | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | -1 | 34607 | 35545 |
| YP_009322211.1 | NC_031918_p14 | hypothetical protein | phrog_16624 | unknown function | unknown function | -1 | 7523 | 7831 |
| YP_009322198.1 | NC_031918_p1 | hypothetical protein | phrog_13301 | unknown function | unknown function | 1 | 557 | 763 |
| YP_009322224.1 | NC_031918_p27 | hypothetical protein | phrog_766 | head decoration | head and packaging | 1 | 12610 | 13077 |
| YP_009322219.1 | NC_031918_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10182 | 10346 |
| YP_009322217.1 | NC_031918_p20 | hypothetical protein | phrog_1785 | unknown function | unknown function | 1 | 9233 | 9448 |
| YP_009322244.1 | NC_031918_p47 | hypothetical protein | phrog_17424 | unknown function | unknown function | -1 | 22343 | 22468 |
| YP_009322212.1 | NC_031918_p15 | hypothetical protein | phrog_38236 | unknown function | unknown function | -1 | 7834 | 8046 |
| YP_009322203.1 | NC_031918_p6 | hypothetical protein | phrog_7798 | unknown function | unknown function | -1 | 4678 | 5313 |
| YP_009322255.1 | NC_031918_p58 | hypothetical protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 33930 | 34595 |
| YP_009322226.1 | NC_031918_p29 | hypothetical protein | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 14187 | 14993 |
| YP_009322202.1 | NC_031918_p5 | hypothetical protein | phrog_681 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 3471 | 4559 |
| YP_009322207.1 | NC_031918_p10 | lysin | phrog_90 | endolysin | lysis | 1 | 6060 | 6524 |
| YP_009322199.1 | NC_031918_p2 | hypothetical protein | phrog_17303 | unknown function | unknown function | 1 | 767 | 958 |
| YP_009322237.1 | NC_031918_p40 | hypothetical protein | phrog_786 | unknown function | unknown function | 1 | 18676 | 19068 |
| YP_009322245.1 | NC_031918_p48 | hypothetical protein | phrog_2315 | unknown function | unknown function | -1 | 22478 | 22771 |
| YP_009322253.1 | NC_031918_p56 | tail fibers protein | phrog_1819 | tail spike protein | tail | 1 | 31140 | 33167 |
| YP_009322223.1 | NC_031918_p26 | hypothetical protein | phrog_760 | unknown function | unknown function | 1 | 11198 | 12610 |
| YP_009322251.1 | NC_031918_p54 | hypothetical protein | phrog_329 | minor tail protein | tail | 1 | 28235 | 28705 |
| YP_009322231.1 | NC_031918_p34 | hypothetical protein | phrog_1033 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | -1 | 16224 | 17033 |
| YP_009322240.1 | NC_031918_p43 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 19801 | 20292 |
| YP_009322248.1 | NC_031918_p51 | hypothetical protein | phrog_681 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 26097 | 27164 |
| YP_009322241.1 | NC_031918_p44 | hypothetical protein | phrog_782 | unknown function | unknown function | 1 | 20463 | 20837 |
| YP_009322242.1 | NC_031918_p45 | neck whiskers protein | phrog_853 | major tail protein | tail | 1 | 21374 | 22093 |
| YP_009322213.1 | NC_031918_p16 | hypothetical protein | phrog_17775 | unknown function | unknown function | -1 | 8046 | 8537 |
| YP_009322204.1 | NC_031918_p7 | hypothetical protein | phrog_1273 | unknown function | unknown function | -1 | 5288 | 5536 |
| YP_009322225.1 | NC_031918_p28 | hypothetical protein | phrog_771 | virion structural protein | head and packaging | 1 | 13089 | 14162 |
| YP_009322222.1 | NC_031918_p25 | hypothetical protein | phrog_18423 | unknown function | unknown function | 1 | 10857 | 11003 |
| YP_009322257.1 | NC_031918_p60 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 35549 | 36052 |
| YP_009322221.1 | NC_031918_p24 | hypothetical protein | phrog_14549 | unknown function | unknown function | 1 | 10534 | 10860 |
| YP_009322228.1 | NC_031918_p31 | DNA polymerase III beta subunit | phrog_3007 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 15309 | 15845 |
| YP_009322266.1 | NC_031918_p69 | hypothetical protein | phrog_2180 | unknown function | unknown function | 1 | 43102 | 43248 |
| YP_009322270.1 | NC_031918_p73 | hypothetical protein | phrog_18384 | unknown function | unknown function | 1 | 44354 | 44575 |