functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
NC_031919 |
Definition |
Flavobacterium phage Fpv8, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
42696 |
Host Name |
Flavobacterium psychrophilum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
32 |
Number of singletons |
0 |
Number of paralogs |
0 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
YP_009322285.1 | NC_031919_p14 | hypothetical protein | phrog_12180 | unknown function | unknown function | 1 | 16740 | 17696 |
YP_009322292.1 | NC_031919_p21 | hypothetical protein | phrog_4763 | unknown function | unknown function | 1 | 21235 | 21948 |
YP_009322325.1 | NC_031919_p54 | hypothetical protein | phrog_9957 | unknown function | unknown function | 1 | 38509 | 38880 |
YP_009322294.1 | NC_031919_p23 | hypothetical protein | phrog_14628 | unknown function | unknown function | 1 | 22748 | 23788 |
YP_009322328.1 | NC_031919_p57 | hypothetical protein | phrog_7376 | portal protein | head and packaging | 1 | 40353 | 42068 |
YP_009322279.1 | NC_031919_p8 | structural protein | phrog_14476 | virion structural protein | head and packaging | 1 | 5444 | 8755 |
YP_009322329.1 | NC_031919_p58 | hypothetical protein | phrog_14563 | unknown function | unknown function | 1 | 42087 | 42677 |
YP_009322298.1 | NC_031919_p27 | hypothetical protein | phrog_5443 | unknown function | unknown function | 1 | 25012 | 25296 |
YP_009322318.1 | NC_031919_p47 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 34927 | 36147 |
YP_009322272.1 | NC_031919_p1 | hypothetical protein | phrog_7970 | virion structural protein | head and packaging | 1 | 18 | 992 |
YP_009322301.1 | NC_031919_p30 | hypothetical protein | phrog_14663 | unknown function | unknown function | 1 | 26332 | 26637 |
YP_009322281.1 | NC_031919_p10 | hypothetical protein | phrog_13115 | unknown function | unknown function | 1 | 10518 | 10751 |
YP_009322283.1 | NC_031919_p12 | hypothetical protein | phrog_12000 | unknown function | unknown function | 1 | 13290 | 14486 |
YP_009322321.1 | NC_031919_p50 | hypothetical protein | phrog_13638 | unknown function | unknown function | 1 | 37300 | 37527 |
YP_009322320.1 | NC_031919_p49 | hypothetical protein | phrog_13650 | unknown function | unknown function | 1 | 36889 | 37236 |
YP_009322323.1 | NC_031919_p52 | hypothetical protein | phrog_13207 | unknown function | unknown function | 1 | 37886 | 38245 |
YP_009322319.1 | NC_031919_p48 | hypothetical protein | phrog_452 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 36156 | 36539 |
YP_009322299.1 | NC_031919_p28 | hypothetical protein | phrog_9513 | unknown function | unknown function | 1 | 25322 | 25942 |
YP_009322273.1 | NC_031919_p2 | structural protein | phrog_7231 | virion structural protein | head and packaging | 1 | 1019 | 2068 |
YP_009322327.1 | NC_031919_p56 | structural protein | phrog_8193 | major head protein | head and packaging | 1 | 39559 | 40176 |
YP_009322296.1 | NC_031919_p25 | hypothetical protein | phrog_13145 | unknown function | unknown function | 1 | 24256 | 24636 |
YP_009322314.1 | NC_031919_p43 | hypothetical protein | phrog_13210 | unknown function | unknown function | 1 | 33132 | 33743 |
YP_009322306.1 | NC_031919_p35 | hypothetical protein | phrog_14020 | unknown function | unknown function | 1 | 29046 | 29294 |
YP_009322317.1 | NC_031919_p46 | DNA packaging protein | phrog_606 | terminase small subunit | head and packaging | 1 | 34438 | 34923 |
YP_009322276.1 | NC_031919_p5 | hypothetical protein | phrog_8145 | unknown function | unknown function | 1 | 3679 | 4269 |
YP_009322308.1 | NC_031919_p37 | DNA polymerase III epsilon subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29684 | 30418 |
YP_009322277.1 | NC_031919_p6 | hypothetical protein | phrog_13297 | unknown function | unknown function | 1 | 4289 | 4552 |
YP_009322326.1 | NC_031919_p55 | hypothetical protein | phrog_13579 | unknown function | unknown function | 1 | 38954 | 39403 |
YP_009322287.1 | NC_031919_p16 | hypothetical protein | phrog_14595 | unknown function | unknown function | 1 | 18129 | 18782 |
YP_009322310.1 | NC_031919_p39 | hypothetical protein | phrog_1365 | unknown function | unknown function | 1 | 31483 | 31836 |
YP_009322284.1 | NC_031919_p13 | hypothetical protein | phrog_13374 | unknown function | unknown function | 1 | 14499 | 16736 |
YP_009322278.1 | NC_031919_p7 | structural protein | phrog_8914 | virion structural protein | head and packaging | 1 | 4556 | 5308 |
YP_009322290.1 | NC_031919_p19 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 20225 | 20479 |
YP_009322313.1 | NC_031919_p42 | hypothetical protein | phrog_14426 | unknown function | unknown function | 1 | 32782 | 33129 |
YP_009322280.1 | NC_031919_p9 | hypothetical protein | phrog_12387 | unknown function | unknown function | 1 | 8758 | 10521 |
YP_009322322.1 | NC_031919_p51 | hypothetical protein | phrog_14160 | unknown function | unknown function | 1 | 37509 | 37769 |
YP_009322297.1 | NC_031919_p26 | hypothetical protein | phrog_2113 | unknown function | unknown function | 1 | 24533 | 25015 |
YP_009322312.1 | NC_031919_p41 | hypothetical protein | phrog_14413 | unknown function | unknown function | 1 | 32439 | 32936 |
YP_009322303.1 | NC_031919_p32 | hypothetical protein | phrog_9620 | unknown function | unknown function | 1 | 27113 | 27328 |
YP_009322295.1 | NC_031919_p24 | hypothetical protein | phrog_4632 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 23754 | 24293 |
YP_009322309.1 | NC_031919_p38 | hypothetical protein | phrog_116 | DNA methyltransferase | other | 1 | 30419 | 31486 |
YP_009322293.1 | NC_031919_p22 | hypothetical protein | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 21949 | 22746 |
YP_009322307.1 | NC_031919_p36 | hypothetical protein | phrog_8580 | unknown function | unknown function | 1 | 29242 | 29472 |
YP_009322291.1 | NC_031919_p20 | hypothetical protein | phrog_14584 | unknown function | unknown function | 1 | 20590 | 21165 |
YP_009322304.1 | NC_031919_p33 | hypothetical protein | phrog_14351 | unknown function | unknown function | 1 | 27331 | 28710 |
YP_009322282.1 | NC_031919_p11 | hypothetical protein | phrog_12056 | unknown function | unknown function | 1 | 10744 | 13257 |
YP_009322286.1 | NC_031919_p15 | hypothetical protein | phrog_14274 | unknown function | unknown function | 1 | 17713 | 18144 |
YP_009322302.1 | NC_031919_p31 | hypothetical protein | phrog_4932 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 26642 | 27025 |
YP_009322275.1 | NC_031919_p4 | hypothetical protein | phrog_6195 | tail protein | tail | 1 | 3270 | 3704 |
YP_009322324.1 | NC_031919_p53 | hypothetical protein | phrog_13886 | unknown function | unknown function | 1 | 38232 | 38519 |
YP_009322315.1 | NC_031919_p44 | hypothetical protein | phrog_12515 | unknown function | unknown function | 1 | 33740 | 34045 |
YP_009322300.1 | NC_031919_p29 | hypothetical protein | phrog_7108 | unknown function | unknown function | 1 | 25974 | 26444 |
YP_009322274.1 | NC_031919_p3 | hypothetical protein | phrog_8189 | unknown function | unknown function | 1 | 2141 | 3277 |
YP_009322288.1 | NC_031919_p17 | hypothetical protein | phrog_1259 | baseplate hub subunit and tail lysozyme | tail | 1 | 18775 | 19311 |
YP_009322311.1 | NC_031919_p40 | conjugal transfer protein | phrog_799 | DNA methyltransferase | other | 1 | 31817 | 32248 |
YP_009322316.1 | NC_031919_p45 | hypothetical protein | phrog_11000 | unknown function | unknown function | 1 | 34049 | 34273 |
YP_009322289.1 | NC_031919_p18 | hypothetical protein | phrog_13143 | unknown function | unknown function | 1 | 19301 | 19885 |
YP_009322305.1 | NC_031919_p34 | hypothetical protein | phrog_13960 | unknown function | unknown function | 1 | 28729 | 29046 |