Genomic map of Streptococcus phage phiARI0004 (NC_031920)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031920
Definition
Streptococcus phage phiARI0004, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
41105
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
40.65
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009322367.1 NC_031920_p38 hypothetical protein phrog_4614 unknown function unknown function -1 33399 33509
YP_009322346.1 NC_031920_p17 hypothetical protein phrog_774 unknown function unknown function -1 18689 18901
YP_009322374.1 NC_031920_p45 hypothetical protein phrog_5570 unknown function unknown function -1 37306 37581
YP_009322336.1 NC_031920_p7 hypothetical protein phrog_1194 unknown function unknown function -1 10035 10385
YP_009322355.1 NC_031920_p26 hypothetical protein phrog_2715 unknown function unknown function -1 26067 26516
YP_009322357.1 NC_031920_p28 DUF1642 domain protein phrog_121 unknown function unknown function -1 27561 28235
YP_009322341.1 NC_031920_p12 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 15589 16104
YP_009322368.1 NC_031920_p39 hypothetical protein phrog_22807 unknown function unknown function -1 33587 33709
YP_009322366.1 NC_031920_p37 hypothetical protein phrog_16291 unknown function unknown function -1 33148 33333
YP_009322330.1 NC_031920_p1 hypothetical protein phrog_12172 unknown function unknown function -1 11 268
YP_009322333.1 NC_031920_p4 hypothetical protein phrog_1164 unknown function unknown function -1 2103 2453
YP_009322340.1 NC_031920_p11 hypothetical protein phrog_78 tail terminator connector -1 15224 15592
YP_009322375.1 NC_031920_p46 HTH_19 domain protein phrog_4 transcriptional repressor transcription regulation 1 37742 38494
YP_009322344.1 NC_031920_p15 hypothetical protein phrog_544 major head protein head and packaging -1 17083 17928
YP_009322370.1 NC_031920_p41 hypothetical protein phrog_2648 unknown function unknown function -1 34115 34336
YP_009322359.1 NC_031920_p30 hypothetical protein phrog_2131 unknown function unknown function -1 28599 29021
YP_009322362.1 NC_031920_p33 cytosine specific DNA methyltransferase phrog_67 DNA methyltransferase other -1 30044 30739
YP_009322342.1 NC_031920_p13 hypothetical protein phrog_933 unknown function unknown function -1 16711 16899
YP_009322356.1 NC_031920_p27 hypothetical protein phrog_2003 unknown function unknown function -1 27274 27561
YP_009322334.1 NC_031920_p5 hypothetical protein phrog_1137 unknown function unknown function -1 2456 2659
YP_009322354.1 NC_031920_p25 YopX domain protein phrog_98 unknown function unknown function -1 25656 26048
YP_009322376.1 NC_031920_p47 PemK domain protein phrog_1412 antitoxin mazE-like moron, auxiliary metabolic gene and host takeover 1 38496 39260
YP_009322373.1 NC_031920_p44 hypothetical protein phrog_4488 unknown function unknown function -1 37110 37232
YP_009322369.1 NC_031920_p40 hypothetical protein phrog_8343 unknown function unknown function -1 33860 34114
YP_009322347.1 NC_031920_p18 hypothetical protein phrog_5469 unknown function unknown function -1 18856 19020
YP_009322365.1 NC_031920_p36 RecT domain protein phrog_2760 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 32378 33130
YP_009322372.1 NC_031920_p43 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 35855 36091
YP_009322364.1 NC_031920_p35 DUF1351 domain protein phrog_674 unknown function unknown function -1 31304 32368
YP_009322348.1 NC_031920_p19 hypothetical protein phrog_2841 minor head protein head and packaging -1 19370 20866
YP_009322337.1 NC_031920_p8 hypothetical protein phrog_1535 tail length tape measure protein tail -1 10394 14047
YP_009322361.1 NC_031920_p32 hypothetical protein phrog_1341 unknown function unknown function -1 29490 29819
YP_009322363.1 NC_031920_p34 single stranded DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 30752 31168
YP_009322343.1 NC_031920_p14 hypothetical protein phrog_2250 unknown function unknown function -1 16889 17071
YP_009322371.1 NC_031920_p42 hypothetical protein phrog_3624 unknown function unknown function -1 34336 34497
YP_009322352.1 NC_031920_p23 DUF1492 domain protein phrog_36 transcriptional regulator transcription regulation -1 24494 24853
YP_009322360.1 NC_031920_p31 rusA domain protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 29065 29493
YP_009322335.1 NC_031920_p6 peptidase_S74 domain protein phrog_1210 PblB-type receptor binding other -1 2753 10030
YP_009322377.1 NC_031920_p48 Resolvase domain protein phrog_95 integrase integration and excision 1 39567 41012
YP_009322339.1 NC_031920_p10 tail_3 domain protein phrog_158 major tail protein tail -1 14808 15221
YP_009322345.1 NC_031920_p16 hypothetical protein phrog_172 head scaffolding protein head and packaging -1 17935 18519
YP_009322350.1 NC_031920_p21 terminase_3 domain protein phrog_2 terminase large subunit head and packaging -1 22310 23608
YP_009322349.1 NC_031920_p20 hypothetical protein phrog_64 portal protein head and packaging -1 20829 22298
YP_009322351.1 NC_031920_p22 terminase_2 domain protein phrog_51 terminase small subunit head and packaging -1 23586 24026
YP_009322358.1 NC_031920_p29 hypothetical protein phrog_834 unknown function unknown function -1 28237 28554
YP_009322338.1 NC_031920_p9 hypothetical protein phrog_183 tail chaperone protein tail -1 14423 14803
YP_009322332.1 NC_031920_p3 holin_LLH domain protein phrog_608 holin lysis -1 1456 1791
YP_009322353.1 NC_031920_p24 hypothetical protein phrog_3476 unknown function unknown function -1 24971 25342
YP_009322331.1 NC_031920_p2 amidase_2 domain protein phrog_1110 endolysin lysis -1 500 1456