| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031921 |
Definition |
Flavobacterium phage Fpv5, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
42696 |
Host Name |
Flavobacterium psychrophilum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
32 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009322431.1 | NC_031921_p54 | hypothetical protein | phrog_9957 | unknown function | unknown function | 1 | 38509 | 38880 |
| YP_009322386.1 | NC_031921_p9 | hypothetical protein | phrog_12387 | unknown function | unknown function | 1 | 8758 | 10521 |
| YP_009322411.1 | NC_031921_p34 | hypothetical protein | phrog_13960 | unknown function | unknown function | 1 | 28729 | 29046 |
| YP_009322428.1 | NC_031921_p51 | hypothetical protein | phrog_14160 | unknown function | unknown function | 1 | 37509 | 37769 |
| YP_009322401.1 | NC_031921_p24 | hypothetical protein | phrog_4632 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 23754 | 24293 |
| YP_009322423.1 | NC_031921_p46 | DNA packaging protein | phrog_606 | terminase small subunit | head and packaging | 1 | 34438 | 34923 |
| YP_009322408.1 | NC_031921_p31 | hypothetical protein | phrog_4932 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 26642 | 27025 |
| YP_009322387.1 | NC_031921_p10 | hypothetical protein | phrog_13115 | unknown function | unknown function | 1 | 10518 | 10751 |
| YP_009322429.1 | NC_031921_p52 | hypothetical protein | phrog_13207 | unknown function | unknown function | 1 | 37886 | 38245 |
| YP_009322420.1 | NC_031921_p43 | hypothetical protein | phrog_13210 | unknown function | unknown function | 1 | 33132 | 33743 |
| YP_009322416.1 | NC_031921_p39 | hypothetical protein | phrog_1365 | unknown function | unknown function | 1 | 31483 | 31836 |
| YP_009322403.1 | NC_031921_p26 | hypothetical protein | phrog_2113 | unknown function | unknown function | 1 | 24533 | 25015 |
| YP_009322400.1 | NC_031921_p23 | hypothetical protein | phrog_14628 | unknown function | unknown function | 1 | 22748 | 23788 |
| YP_009322380.1 | NC_031921_p3 | hypothetical protein | phrog_8189 | unknown function | unknown function | 1 | 2141 | 3277 |
| YP_009322383.1 | NC_031921_p6 | hypothetical protein | phrog_13297 | unknown function | unknown function | 1 | 4289 | 4552 |
| YP_009322402.1 | NC_031921_p25 | hypothetical protein | phrog_13145 | unknown function | unknown function | 1 | 24256 | 24636 |
| YP_009322397.1 | NC_031921_p20 | hypothetical protein | phrog_14584 | unknown function | unknown function | 1 | 20590 | 21165 |
| YP_009322426.1 | NC_031921_p49 | hypothetical protein | phrog_13650 | unknown function | unknown function | 1 | 36889 | 37236 |
| YP_009322430.1 | NC_031921_p53 | hypothetical protein | phrog_13886 | unknown function | unknown function | 1 | 38232 | 38519 |
| YP_009322395.1 | NC_031921_p18 | hypothetical protein | phrog_13143 | unknown function | unknown function | 1 | 19301 | 19885 |
| YP_009322422.1 | NC_031921_p45 | hypothetical protein | phrog_11000 | unknown function | unknown function | 1 | 34049 | 34273 |
| YP_009322413.1 | NC_031921_p36 | hypothetical protein | phrog_8580 | unknown function | unknown function | 1 | 29242 | 29472 |
| YP_009322427.1 | NC_031921_p50 | hypothetical protein | phrog_13638 | unknown function | unknown function | 1 | 37300 | 37527 |
| YP_009322434.1 | NC_031921_p57 | hypothetical protein | phrog_7376 | portal protein | head and packaging | 1 | 40353 | 42068 |
| YP_009322414.1 | NC_031921_p37 | DNA polymerase III epsilon subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29684 | 30418 |
| YP_009322398.1 | NC_031921_p21 | hypothetical protein | phrog_4763 | unknown function | unknown function | 1 | 21235 | 21948 |
| YP_009322419.1 | NC_031921_p42 | hypothetical protein | phrog_14426 | unknown function | unknown function | 1 | 32782 | 33129 |
| YP_009322389.1 | NC_031921_p12 | hypothetical protein | phrog_12000 | unknown function | unknown function | 1 | 13290 | 14486 |
| YP_009322388.1 | NC_031921_p11 | hypothetical protein | phrog_12056 | unknown function | unknown function | 1 | 10744 | 13257 |
| YP_009322415.1 | NC_031921_p38 | hypothetical protein | phrog_116 | DNA methyltransferase | other | 1 | 30419 | 31486 |
| YP_009322435.1 | NC_031921_p58 | hypothetical protein | phrog_14563 | unknown function | unknown function | 1 | 42087 | 42677 |
| YP_009322379.1 | NC_031921_p2 | structural protein | phrog_7231 | virion structural protein | head and packaging | 1 | 1019 | 2068 |
| YP_009322410.1 | NC_031921_p33 | hypothetical protein | phrog_14351 | unknown function | unknown function | 1 | 27331 | 28710 |
| YP_009322433.1 | NC_031921_p56 | structural protein | phrog_8193 | major head protein | head and packaging | 1 | 39559 | 40176 |
| YP_009322432.1 | NC_031921_p55 | hypothetical protein | phrog_13579 | unknown function | unknown function | 1 | 38954 | 39403 |
| YP_009322378.1 | NC_031921_p1 | hypothetical protein | phrog_7970 | virion structural protein | head and packaging | 1 | 18 | 992 |
| YP_009322417.1 | NC_031921_p40 | conjugal transfer protein | phrog_799 | DNA methyltransferase | other | 1 | 31817 | 32248 |
| YP_009322424.1 | NC_031921_p47 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 34927 | 36147 |
| YP_009322407.1 | NC_031921_p30 | hypothetical protein | phrog_14663 | unknown function | unknown function | 1 | 26332 | 26637 |
| YP_009322404.1 | NC_031921_p27 | hypothetical protein | phrog_5443 | unknown function | unknown function | 1 | 25012 | 25296 |
| YP_009322396.1 | NC_031921_p19 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 20225 | 20479 |
| YP_009322421.1 | NC_031921_p44 | hypothetical protein | phrog_12515 | unknown function | unknown function | 1 | 33740 | 34045 |
| YP_009322405.1 | NC_031921_p28 | hypothetical protein | phrog_9513 | unknown function | unknown function | 1 | 25322 | 25942 |
| YP_009322385.1 | NC_031921_p8 | structural protein | phrog_14476 | virion structural protein | head and packaging | 1 | 5444 | 8755 |
| YP_009322391.1 | NC_031921_p14 | hypothetical protein | phrog_12180 | unknown function | unknown function | 1 | 16740 | 17696 |
| YP_009322399.1 | NC_031921_p22 | hypothetical protein | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 21949 | 22746 |
| YP_009322412.1 | NC_031921_p35 | hypothetical protein | phrog_14020 | unknown function | unknown function | 1 | 29046 | 29294 |
| YP_009322425.1 | NC_031921_p48 | hypothetical protein | phrog_452 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 36156 | 36539 |
| YP_009322406.1 | NC_031921_p29 | hypothetical protein | phrog_7108 | unknown function | unknown function | 1 | 25974 | 26444 |
| YP_009322392.1 | NC_031921_p15 | hypothetical protein | phrog_14274 | unknown function | unknown function | 1 | 17713 | 18144 |
| YP_009322409.1 | NC_031921_p32 | hypothetical protein | phrog_9620 | unknown function | unknown function | 1 | 27113 | 27328 |
| YP_009322384.1 | NC_031921_p7 | structural protein | phrog_8914 | virion structural protein | head and packaging | 1 | 4556 | 5308 |
| YP_009322393.1 | NC_031921_p16 | hypothetical protein | phrog_14595 | unknown function | unknown function | 1 | 18129 | 18782 |
| YP_009322394.1 | NC_031921_p17 | hypothetical protein | phrog_1259 | baseplate hub subunit and tail lysozyme | tail | 1 | 18775 | 19311 |
| YP_009322382.1 | NC_031921_p5 | hypothetical protein | phrog_8145 | unknown function | unknown function | 1 | 3679 | 4269 |
| YP_009322390.1 | NC_031921_p13 | hypothetical protein | phrog_13374 | unknown function | unknown function | 1 | 14499 | 16736 |
| YP_009322381.1 | NC_031921_p4 | hypothetical protein | phrog_6195 | tail protein | tail | 1 | 3270 | 3704 |
| YP_009322418.1 | NC_031921_p41 | hypothetical protein | phrog_14413 | unknown function | unknown function | 1 | 32439 | 32936 |