Genomic map of Streptococcus phage phiARI0468-2 (NC_031923)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031923
Definition
Streptococcus phage phiARI0468-2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
42186
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
40.36
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009322694.1 NC_031923_p30 Prim-Pol domain protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 30198 31019
YP_009322706.1 NC_031923_p42 hypothetical protein phrog_7728 unknown function unknown function 1 37616 37807
YP_009322673.1 NC_031923_p9 tail_3 domain protein phrog_158 major tail protein tail -1 14229 14642
YP_009322704.1 NC_031923_p40 hypothetical protein phrog_2648 unknown function unknown function -1 36811 37005
YP_009322686.1 NC_031923_p22 DUF1492 domain protein phrog_36 transcriptional regulator transcription regulation -1 23861 24220
YP_009322685.1 NC_031923_p21 terminase_2 domain protein phrog_51 terminase small subunit head and packaging -1 23007 23438
YP_009322711.1 NC_031923_p47 DUF955 domain protein phrog_1516 unknown function unknown function 1 39289 40047
YP_009322672.1 NC_031923_p8 hypothetical protein phrog_183 tail chaperone protein tail -1 13844 14224
YP_009322708.1 NC_031923_p44 hypothetical protein phrog_1337 DNA binding protein DNA, RNA and nucleotide metabolism -1 37990 38181
YP_009322682.1 NC_031923_p18 hypothetical protein phrog_2841 minor head protein head and packaging -1 18791 20287
YP_009322678.1 NC_031923_p14 hypothetical protein phrog_544 major head protein head and packaging -1 16504 17349
YP_009322692.1 NC_031923_p28 hypothetical protein phrog_834 unknown function unknown function -1 27603 27917
YP_009322683.1 NC_031923_p19 hypothetical protein phrog_64 portal protein head and packaging -1 20250 21719
YP_009322679.1 NC_031923_p15 hypothetical protein phrog_172 head scaffolding protein head and packaging -1 17356 17940
YP_009322705.1 NC_031923_p41 hypothetical protein phrog_2273 unknown function unknown function -1 37002 37274
YP_009322710.1 NC_031923_p46 HTH_26 domain protein phrog_8 transcriptional regulator transcription regulation 1 38903 39286
YP_009322677.1 NC_031923_p13 hypothetical protein phrog_2250 unknown function unknown function -1 16310 16492
YP_009322667.1 NC_031923_p3 hypothetical protein phrog_1164 unknown function unknown function -1 1604 1954
YP_009322703.1 NC_031923_p39 hypothetical protein phrog_633 transcriptional regulator transcription regulation -1 36270 36611
YP_009322702.1 NC_031923_p38 HNH_3 domain protein phrog_1891 HNH endonuclease DNA, RNA and nucleotide metabolism -1 35303 36025
YP_009322689.1 NC_031923_p25 hypothetical protein phrog_2715 unknown function unknown function -1 25433 25882
YP_009322666.1 NC_031923_p2 holin_LLH domain protein phrog_608 holin lysis -1 957 1292
YP_009322699.1 NC_031923_p35 hypothetical protein phrog_1981 unknown function unknown function -1 33984 34469
YP_009322707.1 NC_031923_p43 hypothetical protein phrog_4192 unknown function unknown function -1 37764 37967
YP_009322674.1 NC_031923_p10 DUF3168 domain protein phrog_78 tail terminator connector -1 14645 15013
YP_009322671.1 NC_031923_p7 hypothetical protein phrog_1535 tail length tape measure protein tail -1 9815 13468
YP_009322696.1 NC_031923_p32 AAA_24 domain protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 31715 32491
YP_009322680.1 NC_031923_p16 hypothetical protein phrog_774 unknown function unknown function -1 18110 18322
YP_009322668.1 NC_031923_p4 hypothetical protein phrog_1137 unknown function unknown function -1 1957 2160
YP_009322697.1 NC_031923_p33 hypothetical protein phrog_2486 unknown function unknown function -1 32491 32808
YP_009322695.1 NC_031923_p31 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 31192 31695
YP_009322698.1 NC_031923_p34 type III restriction endonuclease domain protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 32828 34021
YP_009322676.1 NC_031923_p12 hypothetical protein phrog_933 unknown function unknown function -1 16132 16320
YP_009322684.1 NC_031923_p20 terminase_3 domain protein phrog_2 terminase large subunit head and packaging -1 21731 23029
YP_009322665.1 NC_031923_p1 amidase_2 domain protein phrog_1110 endolysin lysis -1 1 957
YP_009322701.1 NC_031923_p37 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism -1 34828 35310
YP_009322700.1 NC_031923_p36 hypothetical protein phrog_1341 unknown function unknown function -1 34469 34828
YP_009322712.1 NC_031923_p48 zf-ribbon-3 domain protein phrog_27136 unknown function unknown function 1 40175 40849
YP_009322709.1 NC_031923_p45 hypothetical protein phrog_7607 unknown function unknown function 1 38246 38485
YP_009322675.1 NC_031923_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 15010 15525
YP_009322681.1 NC_031923_p17 hypothetical protein phrog_5469 unknown function unknown function -1 18277 18441
YP_009322687.1 NC_031923_p23 hypothetical protein phrog_3476 unknown function unknown function -1 24337 24708
YP_009322669.1 NC_031923_p5 peptidase_S74 domain protein phrog_1210 PblB-type receptor binding other -1 2255 9451
YP_009322688.1 NC_031923_p24 YopX domain protein phrog_98 unknown function unknown function -1 25022 25414
YP_009322690.1 NC_031923_p26 hypothetical protein phrog_2003 unknown function unknown function -1 26640 26927
YP_009322691.1 NC_031923_p27 DUF1642 domain protein phrog_121 unknown function unknown function -1 26927 27601
YP_009322713.1 NC_031923_p49 integrase domain protein phrog_1 integrase integration and excision 1 40972 42099
YP_009322670.1 NC_031923_p6 hypothetical protein phrog_1194 unknown function unknown function -1 9456 9806
YP_009322693.1 NC_031923_p29 VirE domain protein phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism -1 28852 30195