| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031923 |
Definition |
Streptococcus phage phiARI0468-2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
42186 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
40.36 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009322694.1 | NC_031923_p30 | Prim-Pol domain protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 30198 | 31019 |
| YP_009322706.1 | NC_031923_p42 | hypothetical protein | phrog_7728 | unknown function | unknown function | 1 | 37616 | 37807 |
| YP_009322673.1 | NC_031923_p9 | tail_3 domain protein | phrog_158 | major tail protein | tail | -1 | 14229 | 14642 |
| YP_009322704.1 | NC_031923_p40 | hypothetical protein | phrog_2648 | unknown function | unknown function | -1 | 36811 | 37005 |
| YP_009322686.1 | NC_031923_p22 | DUF1492 domain protein | phrog_36 | transcriptional regulator | transcription regulation | -1 | 23861 | 24220 |
| YP_009322685.1 | NC_031923_p21 | terminase_2 domain protein | phrog_51 | terminase small subunit | head and packaging | -1 | 23007 | 23438 |
| YP_009322711.1 | NC_031923_p47 | DUF955 domain protein | phrog_1516 | unknown function | unknown function | 1 | 39289 | 40047 |
| YP_009322672.1 | NC_031923_p8 | hypothetical protein | phrog_183 | tail chaperone protein | tail | -1 | 13844 | 14224 |
| YP_009322708.1 | NC_031923_p44 | hypothetical protein | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 37990 | 38181 |
| YP_009322682.1 | NC_031923_p18 | hypothetical protein | phrog_2841 | minor head protein | head and packaging | -1 | 18791 | 20287 |
| YP_009322678.1 | NC_031923_p14 | hypothetical protein | phrog_544 | major head protein | head and packaging | -1 | 16504 | 17349 |
| YP_009322692.1 | NC_031923_p28 | hypothetical protein | phrog_834 | unknown function | unknown function | -1 | 27603 | 27917 |
| YP_009322683.1 | NC_031923_p19 | hypothetical protein | phrog_64 | portal protein | head and packaging | -1 | 20250 | 21719 |
| YP_009322679.1 | NC_031923_p15 | hypothetical protein | phrog_172 | head scaffolding protein | head and packaging | -1 | 17356 | 17940 |
| YP_009322705.1 | NC_031923_p41 | hypothetical protein | phrog_2273 | unknown function | unknown function | -1 | 37002 | 37274 |
| YP_009322710.1 | NC_031923_p46 | HTH_26 domain protein | phrog_8 | transcriptional regulator | transcription regulation | 1 | 38903 | 39286 |
| YP_009322677.1 | NC_031923_p13 | hypothetical protein | phrog_2250 | unknown function | unknown function | -1 | 16310 | 16492 |
| YP_009322667.1 | NC_031923_p3 | hypothetical protein | phrog_1164 | unknown function | unknown function | -1 | 1604 | 1954 |
| YP_009322703.1 | NC_031923_p39 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | -1 | 36270 | 36611 |
| YP_009322702.1 | NC_031923_p38 | HNH_3 domain protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 35303 | 36025 |
| YP_009322689.1 | NC_031923_p25 | hypothetical protein | phrog_2715 | unknown function | unknown function | -1 | 25433 | 25882 |
| YP_009322666.1 | NC_031923_p2 | holin_LLH domain protein | phrog_608 | holin | lysis | -1 | 957 | 1292 |
| YP_009322699.1 | NC_031923_p35 | hypothetical protein | phrog_1981 | unknown function | unknown function | -1 | 33984 | 34469 |
| YP_009322707.1 | NC_031923_p43 | hypothetical protein | phrog_4192 | unknown function | unknown function | -1 | 37764 | 37967 |
| YP_009322674.1 | NC_031923_p10 | DUF3168 domain protein | phrog_78 | tail terminator | connector | -1 | 14645 | 15013 |
| YP_009322671.1 | NC_031923_p7 | hypothetical protein | phrog_1535 | tail length tape measure protein | tail | -1 | 9815 | 13468 |
| YP_009322696.1 | NC_031923_p32 | AAA_24 domain protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 31715 | 32491 |
| YP_009322680.1 | NC_031923_p16 | hypothetical protein | phrog_774 | unknown function | unknown function | -1 | 18110 | 18322 |
| YP_009322668.1 | NC_031923_p4 | hypothetical protein | phrog_1137 | unknown function | unknown function | -1 | 1957 | 2160 |
| YP_009322697.1 | NC_031923_p33 | hypothetical protein | phrog_2486 | unknown function | unknown function | -1 | 32491 | 32808 |
| YP_009322695.1 | NC_031923_p31 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 31192 | 31695 |
| YP_009322698.1 | NC_031923_p34 | type III restriction endonuclease domain protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 32828 | 34021 |
| YP_009322676.1 | NC_031923_p12 | hypothetical protein | phrog_933 | unknown function | unknown function | -1 | 16132 | 16320 |
| YP_009322684.1 | NC_031923_p20 | terminase_3 domain protein | phrog_2 | terminase large subunit | head and packaging | -1 | 21731 | 23029 |
| YP_009322665.1 | NC_031923_p1 | amidase_2 domain protein | phrog_1110 | endolysin | lysis | -1 | 1 | 957 |
| YP_009322701.1 | NC_031923_p37 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | -1 | 34828 | 35310 |
| YP_009322700.1 | NC_031923_p36 | hypothetical protein | phrog_1341 | unknown function | unknown function | -1 | 34469 | 34828 |
| YP_009322712.1 | NC_031923_p48 | zf-ribbon-3 domain protein | phrog_27136 | unknown function | unknown function | 1 | 40175 | 40849 |
| YP_009322709.1 | NC_031923_p45 | hypothetical protein | phrog_7607 | unknown function | unknown function | 1 | 38246 | 38485 |
| YP_009322675.1 | NC_031923_p11 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 15010 | 15525 |
| YP_009322681.1 | NC_031923_p17 | hypothetical protein | phrog_5469 | unknown function | unknown function | -1 | 18277 | 18441 |
| YP_009322687.1 | NC_031923_p23 | hypothetical protein | phrog_3476 | unknown function | unknown function | -1 | 24337 | 24708 |
| YP_009322669.1 | NC_031923_p5 | peptidase_S74 domain protein | phrog_1210 | PblB-type receptor binding | other | -1 | 2255 | 9451 |
| YP_009322688.1 | NC_031923_p24 | YopX domain protein | phrog_98 | unknown function | unknown function | -1 | 25022 | 25414 |
| YP_009322690.1 | NC_031923_p26 | hypothetical protein | phrog_2003 | unknown function | unknown function | -1 | 26640 | 26927 |
| YP_009322691.1 | NC_031923_p27 | DUF1642 domain protein | phrog_121 | unknown function | unknown function | -1 | 26927 | 27601 |
| YP_009322713.1 | NC_031923_p49 | integrase domain protein | phrog_1 | integrase | integration and excision | 1 | 40972 | 42099 |
| YP_009322670.1 | NC_031923_p6 | hypothetical protein | phrog_1194 | unknown function | unknown function | -1 | 9456 | 9806 |
| YP_009322693.1 | NC_031923_p29 | VirE domain protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 28852 | 30195 |