Genomic map of Salmonella phage BPS11Q3 (NC_031925)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031925
Definition
Salmonella phage BPS11Q3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus; unclassified Jerseyvirus.
DB of origin
REFSEQ
Length
43788
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
65
%GC
49.7
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009322822.1 NC_031925_p15 hypothetical protein phrog_10200 unknown function unknown function -1 9880 10029
YP_009322832.1 NC_031925_p25 hypothetical protein phrog_3766 unknown function unknown function -1 12857 13060
YP_009322872.1 NC_031925_p65 head protein phrog_4366 head fiber protein head and packaging -1 43291 43575
YP_009322841.1 NC_031925_p34 DNA-binding protein phrog_3 transcriptional repressor transcription regulation -1 18381 18599
YP_009322826.1 NC_031925_p19 hypothetical protein phrog_2180 unknown function unknown function -1 10560 10745
YP_009322835.1 NC_031925_p28 hypothetical protein phrog_9384 unknown function unknown function -1 13954 14118
YP_009322846.1 NC_031925_p39 hypothetical protein phrog_10404 unknown function unknown function 1 24595 24726
YP_009322816.1 NC_031925_p9 portal protein phrog_145 portal protein head and packaging -1 5689 7161
YP_009322854.1 NC_031925_p47 hypothetical protein phrog_329 minor tail protein tail -1 32180 32545
YP_009322844.1 NC_031925_p37 DNA polymerase phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 20823 21449
YP_009322863.1 NC_031925_p56 DNA-binding protein phrog_63 anti-repressor Ant transcription regulation 1 38544 39215
YP_009322849.1 NC_031925_p42 hypothetical protein phrog_4879 unknown function unknown function 1 25615 25806
YP_009322824.1 NC_031925_p17 hypothetical protein phrog_4684 unknown function unknown function -1 10253 10408
YP_009322864.1 NC_031925_p57 tail protein phrog_290 minor tail protein tail -1 39244 40413
YP_009322865.1 NC_031925_p58 tail protein phrog_179 tail terminator connector -1 40413 40832
YP_009322820.1 NC_031925_p13 hypothetical protein phrog_31127 unknown function unknown function -1 9360 9539
YP_009322848.1 NC_031925_p41 restriction endonuclease phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 25296 25583
YP_009322855.1 NC_031925_p48 hypothetical protein phrog_396 minor tail protein tail -1 32542 33057
YP_009322815.1 NC_031925_p8 amidase phrog_6095 amidase lysis 1 5005 5658
YP_009322867.1 NC_031925_p60 tail protein phrog_161 head closure Hc1 connector -1 41224 41583
YP_009322869.1 NC_031925_p62 head-tail joining protein phrog_477 head-tail adaptor Ad1 connector -1 42191 42700
YP_009322856.1 NC_031925_p49 hypothetical protein phrog_384 virion structural protein head and packaging -1 33054 33497
YP_009322847.1 NC_031925_p40 NHN endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 24809 25306
YP_009322837.1 NC_031925_p30 hypothetical protein phrog_2010 unknown function unknown function -1 14630 14839
YP_009322857.1 NC_031925_p50 tape measure protein phrog_1538 tail length tape measure protein tail -1 33556 35889
YP_009322819.1 NC_031925_p12 hypothetical protein phrog_10956 unknown function unknown function -1 9162 9344
YP_009322839.1 NC_031925_p32 UvsX-like protein phrog_5169 unknown function unknown function 1 15891 16124
YP_009322861.1 NC_031925_p54 calcineurin-like phosphoesterase superfamily domain protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 37075 38205
YP_009322810.1 NC_031925_p3 i-Spanin phrog_5672 Rz-like spanin lysis -1 1694 1837
YP_009322858.1 NC_031925_p51 hypothetical protein phrog_4557 unknown function unknown function -1 35882 36241
YP_009322813.1 NC_031925_p6 tail protein phrog_3945 Hoc-like head decoration head and packaging -1 2515 2964
YP_009322814.1 NC_031925_p7 head morphogenesis protein phrog_241 head morphogenesis head and packaging -1 2967 4826
YP_009322812.1 NC_031925_p5 hypothetical protein phrog_14923 unknown function unknown function -1 2233 2352
YP_009322811.1 NC_031925_p4 o-Spanin phrog_2536 Rz-like spanin lysis -1 1803 2189
YP_009322817.1 NC_031925_p10 terminase large subunit phrog_2 terminase large subunit head and packaging -1 7174 8445
YP_009322821.1 NC_031925_p14 hypothetical protein phrog_268 unknown function unknown function -1 9656 9883
YP_009322831.1 NC_031925_p24 hypothetical protein phrog_4947 unknown function unknown function -1 12489 12854
YP_009322827.1 NC_031925_p20 lysozyme phrog_7 endolysin lysis -1 10930 11418
YP_009322871.1 NC_031925_p64 hoc protein phrog_4069 Hoc-like head decoration head and packaging -1 42929 43279
YP_009322836.1 NC_031925_p29 hypothetical protein phrog_15836 unknown function unknown function -1 14456 14611
YP_009322834.1 NC_031925_p27 hypothetical protein singleton unknown function unknown function -1 13777 13890
YP_009322842.1 NC_031925_p35 hypothetical protein phrog_3127 unknown function unknown function 1 18733 19269
YP_009322829.1 NC_031925_p22 hypothetical protein phrog_2359 holin lysis -1 11688 12014
YP_009322860.1 NC_031925_p53 hypothetical protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover 1 36833 37012
YP_009322868.1 NC_031925_p61 neck protein phrog_3614 unknown function unknown function -1 41583 42188
YP_009322808.1 NC_031925_p1 coat protein phrog_247 major head protein head and packaging -1 53 904
YP_009322843.1 NC_031925_p36 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 19311 20741
YP_009322828.1 NC_031925_p21 holin phrog_2508 holin lysis -1 11399 11686
YP_009322833.1 NC_031925_p26 hypothetical protein phrog_6094 unknown function unknown function -1 13248 13784
YP_009322859.1 NC_031925_p52 hypothetical protein phrog_313 Tail assembly chaperone tail -1 36247 36663
YP_009322851.1 NC_031925_p44 hypothetical protein phrog_13851 unknown function unknown function 1 27224 27445
YP_009322845.1 NC_031925_p38 intein-containing DNA polymerase precursor phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 21507 24605
YP_009322850.1 NC_031925_p43 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 25887 27227
YP_009322870.1 NC_031925_p63 hypothetical protein phrog_4451 unknown function unknown function -1 42704 42892
YP_009322818.1 NC_031925_p11 terminase small subunit phrog_3064 terminase head and packaging -1 8435 8941
YP_009322862.1 NC_031925_p55 hypothetical protein singleton unknown function unknown function -1 38180 38581
YP_009322825.1 NC_031925_p18 hypothetical protein phrog_3002 unknown function unknown function -1 10405 10563
YP_009322823.1 NC_031925_p16 hypothetical protein phrog_1402 unknown function unknown function -1 10026 10256
YP_009322852.1 NC_031925_p45 tail spike protein phrog_1819 tail spike protein tail -1 27564 29618
YP_009322853.1 NC_031925_p46 tail fiber protein phrog_469 tail protein tail -1 29631 32105
YP_009322809.1 NC_031925_p2 scaffold protein phrog_206 head scaffolding protein head and packaging -1 908 1609
YP_009322838.1 NC_031925_p31 transcriptional regulator phrog_66 excisionase and transcriptional regulator integration and excision 1 15724 15894
YP_009322830.1 NC_031925_p23 hypothetical protein phrog_1040 peptidase HslV family other -1 12049 12483
YP_009322840.1 NC_031925_p33 replicative helicase primase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism 1 16181 18367
YP_009322866.1 NC_031925_p59 tail protein phrog_169 tail completion or Neck1 protein connector -1 40832 41227