Genomic map of Streptococcus phage phiARI0468-1 (NC_031929)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031929
Definition
Streptococcus phage phiARI0468-1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
41063
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
40.8
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009323503.1 NC_031929_p31 hypothetical protein phrog_1341 unknown function unknown function -1 28582 28911
YP_009323493.1 NC_031929_p21 terminase_2 domain protein phrog_51 terminase small subunit head and packaging -1 22679 23119
YP_009323511.1 NC_031929_p39 hypothetical protein phrog_4614 unknown function unknown function -1 33019 33135
YP_009323507.1 NC_031929_p35 hypothetical protein phrog_4027 unknown function unknown function -1 30455 30958
YP_009323490.1 NC_031929_p18 hypothetical protein phrog_2841 minor head protein head and packaging -1 18463 19959
YP_009323504.1 NC_031929_p32 methyltransf_25 domain protein phrog_954 DNA methyltransferase other -1 29100 29606
YP_009323496.1 NC_031929_p24 YopX domain protein phrog_98 unknown function unknown function -1 24748 25140
YP_009323514.1 NC_031929_p42 ATP-binding phage protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism -1 34045 34899
YP_009323483.1 NC_031929_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 14682 15197
YP_009323487.1 NC_031929_p15 hypothetical protein phrog_172 head scaffolding protein head and packaging -1 17028 17612
YP_009323516.1 NC_031929_p44 hypothetical protein phrog_4488 unknown function unknown function -1 37003 37125
YP_009323517.1 NC_031929_p45 hypothetical protein phrog_5570 unknown function unknown function -1 37199 37474
YP_009323502.1 NC_031929_p30 rusA domain protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 28157 28585
YP_009323500.1 NC_031929_p28 hypothetical protein phrog_834 unknown function unknown function -1 27329 27646
YP_009323495.1 NC_031929_p23 hypothetical protein phrog_3476 unknown function unknown function -1 24063 24434
YP_009323494.1 NC_031929_p22 DUF1492 domain protein phrog_36 transcriptional regulator transcription regulation -1 23587 23946
YP_009323501.1 NC_031929_p29 hypothetical protein phrog_2131 unknown function unknown function -1 27691 28113
YP_009323491.1 NC_031929_p19 hypothetical protein phrog_64 portal protein head and packaging -1 19922 21391
YP_009323480.1 NC_031929_p8 hypothetical protein phrog_183 tail chaperone protein tail -1 13516 13896
YP_009323485.1 NC_031929_p13 hypothetical protein phrog_2250 unknown function unknown function -1 15982 16164
YP_009323505.1 NC_031929_p33 SSB domain protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 29616 30032
YP_009323478.1 NC_031929_p6 hypothetical protein phrog_1194 unknown function unknown function -1 9128 9478
YP_009323476.1 NC_031929_p4 hypothetical protein phrog_1137 unknown function unknown function -1 2442 2645
YP_009323518.1 NC_031929_p46 HTH_3 domain protein phrog_4 transcriptional repressor transcription regulation 1 37649 38452
YP_009323481.1 NC_031929_p9 tail_3 domain protein phrog_158 major tail protein tail -1 13901 14314
YP_009323509.1 NC_031929_p37 RecT domain protein phrog_2760 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 31996 32760
YP_009323508.1 NC_031929_p36 DUF1351 domain protein phrog_674 unknown function unknown function -1 30946 31986
YP_009323489.1 NC_031929_p17 hypothetical protein phrog_5469 unknown function unknown function -1 17949 18113
YP_009323477.1 NC_031929_p5 peptidase_S74 domain protein phrog_1210 PblB-type receptor binding other -1 2740 9123
YP_009323488.1 NC_031929_p16 hypothetical protein phrog_774 unknown function unknown function -1 17782 17994
YP_009323497.1 NC_031929_p25 hypothetical protein phrog_2715 unknown function unknown function -1 25159 25608
YP_009323519.1 NC_031929_p47 PemK domain protein phrog_1412 antitoxin mazE-like moron, auxiliary metabolic gene and host takeover 1 38454 39218
YP_009323512.1 NC_031929_p40 hypothetical protein phrog_22807 unknown function unknown function -1 33207 33329
YP_009323484.1 NC_031929_p12 hypothetical protein phrog_933 unknown function unknown function -1 15804 15992
YP_009323520.1 NC_031929_p48 Resolvase domain protein phrog_95 integrase integration and excision 1 39525 40970
YP_009323479.1 NC_031929_p7 hypothetical protein phrog_1535 tail length tape measure protein tail -1 9487 13140
YP_009323510.1 NC_031929_p38 hypothetical protein phrog_8688 unknown function unknown function -1 32772 33002
YP_009323475.1 NC_031929_p3 hypothetical protein phrog_1164 unknown function unknown function -1 2089 2439
YP_009323513.1 NC_031929_p41 hypothetical protein phrog_2648 unknown function unknown function -1 33460 33666
YP_009323515.1 NC_031929_p43 primosome protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism -1 34909 35760
YP_009323498.1 NC_031929_p26 hypothetical protein phrog_2003 unknown function unknown function -1 26366 26653
YP_009323474.1 NC_031929_p2 holin_LLH domain protein phrog_608 holin lysis -1 1442 1777
YP_009323482.1 NC_031929_p10 DUF3168 domain protein phrog_78 tail terminator connector -1 14317 14685
YP_009323506.1 NC_031929_p34 hypothetical protein phrog_5262 unknown function unknown function -1 30029 30127
YP_009323499.1 NC_031929_p27 DUF1642 domain protein phrog_121 unknown function unknown function -1 26653 27327
YP_009323473.1 NC_031929_p1 amidase_2 domain protein phrog_1110 endolysin lysis -1 486 1442
YP_009323486.1 NC_031929_p14 hypothetical protein phrog_544 major head protein head and packaging -1 16176 17021
YP_009323492.1 NC_031929_p20 terminase_3 domain protein phrog_2 terminase large subunit head and packaging -1 21403 22701