| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031929 |
Definition |
Streptococcus phage phiARI0468-1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
41063 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
48 |
%GC |
40.8 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009323503.1 | NC_031929_p31 | hypothetical protein | phrog_1341 | unknown function | unknown function | -1 | 28582 | 28911 |
| YP_009323493.1 | NC_031929_p21 | terminase_2 domain protein | phrog_51 | terminase small subunit | head and packaging | -1 | 22679 | 23119 |
| YP_009323511.1 | NC_031929_p39 | hypothetical protein | phrog_4614 | unknown function | unknown function | -1 | 33019 | 33135 |
| YP_009323507.1 | NC_031929_p35 | hypothetical protein | phrog_4027 | unknown function | unknown function | -1 | 30455 | 30958 |
| YP_009323490.1 | NC_031929_p18 | hypothetical protein | phrog_2841 | minor head protein | head and packaging | -1 | 18463 | 19959 |
| YP_009323504.1 | NC_031929_p32 | methyltransf_25 domain protein | phrog_954 | DNA methyltransferase | other | -1 | 29100 | 29606 |
| YP_009323496.1 | NC_031929_p24 | YopX domain protein | phrog_98 | unknown function | unknown function | -1 | 24748 | 25140 |
| YP_009323514.1 | NC_031929_p42 | ATP-binding phage protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | -1 | 34045 | 34899 |
| YP_009323483.1 | NC_031929_p11 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 14682 | 15197 |
| YP_009323487.1 | NC_031929_p15 | hypothetical protein | phrog_172 | head scaffolding protein | head and packaging | -1 | 17028 | 17612 |
| YP_009323516.1 | NC_031929_p44 | hypothetical protein | phrog_4488 | unknown function | unknown function | -1 | 37003 | 37125 |
| YP_009323517.1 | NC_031929_p45 | hypothetical protein | phrog_5570 | unknown function | unknown function | -1 | 37199 | 37474 |
| YP_009323502.1 | NC_031929_p30 | rusA domain protein | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 28157 | 28585 |
| YP_009323500.1 | NC_031929_p28 | hypothetical protein | phrog_834 | unknown function | unknown function | -1 | 27329 | 27646 |
| YP_009323495.1 | NC_031929_p23 | hypothetical protein | phrog_3476 | unknown function | unknown function | -1 | 24063 | 24434 |
| YP_009323494.1 | NC_031929_p22 | DUF1492 domain protein | phrog_36 | transcriptional regulator | transcription regulation | -1 | 23587 | 23946 |
| YP_009323501.1 | NC_031929_p29 | hypothetical protein | phrog_2131 | unknown function | unknown function | -1 | 27691 | 28113 |
| YP_009323491.1 | NC_031929_p19 | hypothetical protein | phrog_64 | portal protein | head and packaging | -1 | 19922 | 21391 |
| YP_009323480.1 | NC_031929_p8 | hypothetical protein | phrog_183 | tail chaperone protein | tail | -1 | 13516 | 13896 |
| YP_009323485.1 | NC_031929_p13 | hypothetical protein | phrog_2250 | unknown function | unknown function | -1 | 15982 | 16164 |
| YP_009323505.1 | NC_031929_p33 | SSB domain protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 29616 | 30032 |
| YP_009323478.1 | NC_031929_p6 | hypothetical protein | phrog_1194 | unknown function | unknown function | -1 | 9128 | 9478 |
| YP_009323476.1 | NC_031929_p4 | hypothetical protein | phrog_1137 | unknown function | unknown function | -1 | 2442 | 2645 |
| YP_009323518.1 | NC_031929_p46 | HTH_3 domain protein | phrog_4 | transcriptional repressor | transcription regulation | 1 | 37649 | 38452 |
| YP_009323481.1 | NC_031929_p9 | tail_3 domain protein | phrog_158 | major tail protein | tail | -1 | 13901 | 14314 |
| YP_009323509.1 | NC_031929_p37 | RecT domain protein | phrog_2760 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 31996 | 32760 |
| YP_009323508.1 | NC_031929_p36 | DUF1351 domain protein | phrog_674 | unknown function | unknown function | -1 | 30946 | 31986 |
| YP_009323489.1 | NC_031929_p17 | hypothetical protein | phrog_5469 | unknown function | unknown function | -1 | 17949 | 18113 |
| YP_009323477.1 | NC_031929_p5 | peptidase_S74 domain protein | phrog_1210 | PblB-type receptor binding | other | -1 | 2740 | 9123 |
| YP_009323488.1 | NC_031929_p16 | hypothetical protein | phrog_774 | unknown function | unknown function | -1 | 17782 | 17994 |
| YP_009323497.1 | NC_031929_p25 | hypothetical protein | phrog_2715 | unknown function | unknown function | -1 | 25159 | 25608 |
| YP_009323519.1 | NC_031929_p47 | PemK domain protein | phrog_1412 | antitoxin mazE-like | moron, auxiliary metabolic gene and host takeover | 1 | 38454 | 39218 |
| YP_009323512.1 | NC_031929_p40 | hypothetical protein | phrog_22807 | unknown function | unknown function | -1 | 33207 | 33329 |
| YP_009323484.1 | NC_031929_p12 | hypothetical protein | phrog_933 | unknown function | unknown function | -1 | 15804 | 15992 |
| YP_009323520.1 | NC_031929_p48 | Resolvase domain protein | phrog_95 | integrase | integration and excision | 1 | 39525 | 40970 |
| YP_009323479.1 | NC_031929_p7 | hypothetical protein | phrog_1535 | tail length tape measure protein | tail | -1 | 9487 | 13140 |
| YP_009323510.1 | NC_031929_p38 | hypothetical protein | phrog_8688 | unknown function | unknown function | -1 | 32772 | 33002 |
| YP_009323475.1 | NC_031929_p3 | hypothetical protein | phrog_1164 | unknown function | unknown function | -1 | 2089 | 2439 |
| YP_009323513.1 | NC_031929_p41 | hypothetical protein | phrog_2648 | unknown function | unknown function | -1 | 33460 | 33666 |
| YP_009323515.1 | NC_031929_p43 | primosome protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | -1 | 34909 | 35760 |
| YP_009323498.1 | NC_031929_p26 | hypothetical protein | phrog_2003 | unknown function | unknown function | -1 | 26366 | 26653 |
| YP_009323474.1 | NC_031929_p2 | holin_LLH domain protein | phrog_608 | holin | lysis | -1 | 1442 | 1777 |
| YP_009323482.1 | NC_031929_p10 | DUF3168 domain protein | phrog_78 | tail terminator | connector | -1 | 14317 | 14685 |
| YP_009323506.1 | NC_031929_p34 | hypothetical protein | phrog_5262 | unknown function | unknown function | -1 | 30029 | 30127 |
| YP_009323499.1 | NC_031929_p27 | DUF1642 domain protein | phrog_121 | unknown function | unknown function | -1 | 26653 | 27327 |
| YP_009323473.1 | NC_031929_p1 | amidase_2 domain protein | phrog_1110 | endolysin | lysis | -1 | 486 | 1442 |
| YP_009323486.1 | NC_031929_p14 | hypothetical protein | phrog_544 | major head protein | head and packaging | -1 | 16176 | 17021 |
| YP_009323492.1 | NC_031929_p20 | terminase_3 domain protein | phrog_2 | terminase large subunit | head and packaging | -1 | 21403 | 22701 |