Genomic map of Salmonella phage 118970_sal1 (NC_031930)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031930
Definition
Salmonella phage 118970_sal1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chivirus; unclassified Chivirus.
DB of origin
REFSEQ
Length
59518
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
71
%GC
56.49
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009323589.1 NC_031930_p69 hypothetical protein phrog_8059 unknown function unknown function 1 58407 58613
YP_009323522.1 NC_031930_p2 primase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 1002 3587
YP_009323576.1 NC_031930_p56 exonuclease phrog_724 exonuclease recombination-associated DNA, RNA and nucleotide metabolism -1 50863 51777
YP_009323571.1 NC_031930_p51 hypothetical protein phrog_8386 unknown function unknown function -1 47643 48743
YP_009323557.1 NC_031930_p37 hypothetical protein phrog_7686 Rz-like spanin lysis 1 40392 40730
YP_009323584.1 NC_031930_p64 hypothetical protein phrog_10310 unknown function unknown function 1 55423 56046
YP_009323559.1 NC_031930_p39 hypothetical protein phrog_15395 tail protein tail -1 41453 41734
YP_009323567.1 NC_031930_p47 hypothetical protein phrog_8705 unknown function unknown function -1 45644 45859
YP_009323570.1 NC_031930_p50 DNA methylase domain protein phrog_111 DNA methyltransferase other -1 46957 47643
YP_009323531.1 NC_031930_p11 terminase small subunit phrog_141 terminase small subunit head and packaging 1 10803 11372
YP_009323525.1 NC_031930_p5 hypothetical protein phrog_8318 unknown function unknown function 1 4589 4918
YP_009323554.1 NC_031930_p34 hypothetical protein phrog_2448 unknown function unknown function 1 35925 36944
YP_009323532.1 NC_031930_p12 terminase large subunit phrog_15 terminase large subunit head and packaging 1 11362 13437
YP_009323535.1 NC_031930_p15 portal protein phrog_21 portal protein head and packaging 1 14085 15380
YP_009323534.1 NC_031930_p14 portal protein phrog_30178 portal protein head and packaging 1 13699 14067
YP_009323577.1 NC_031930_p57 exonuclease singleton unknown function unknown function -1 51798 51935
YP_009323588.1 NC_031930_p68 hypothetical protein phrog_3786 unknown function unknown function 1 58131 58403
YP_009323562.1 NC_031930_p42 hypothetical protein phrog_8264 unknown function unknown function -1 43138 43590
YP_009323581.1 NC_031930_p61 hypothetical protein phrog_6647 unknown function unknown function -1 53078 53449
YP_009323587.1 NC_031930_p67 hypothetical protein phrog_10087 unknown function unknown function 1 56950 58119
YP_009323565.1 NC_031930_p45 hypothetical protein phrog_9072 thymidylate synthase complementing protein DNA, RNA and nucleotide metabolism -1 44257 44724
YP_009323575.1 NC_031930_p55 hypothetical protein phrog_7200 unknown function unknown function -1 50627 50860
YP_009323533.1 NC_031930_p13 head-to-tail joining protein W phrog_75 head-tail adaptor Ad1 connector 1 13448 13702
YP_009323556.1 NC_031930_p36 hypothetical protein phrog_7226 unknown function unknown function 1 38198 40327
YP_009323560.1 NC_031930_p40 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 41829 42155
YP_009323527.1 NC_031930_p7 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 6303 6899
YP_009323591.1 NC_031930_p71 hypothetical protein phrog_8116 unknown function unknown function 1 58850 59101
YP_009323563.1 NC_031930_p43 hypothetical protein phrog_9301 unknown function unknown function -1 43587 43898
YP_009323590.1 NC_031930_p70 terminase large subunit phrog_7646 unknown function unknown function 1 58606 58857
YP_009323523.1 NC_031930_p3 hypothetical protein phrog_7401 unknown function unknown function -1 3584 3829
YP_009323549.1 NC_031930_p29 hypothetical protein phrog_1196 tail assembly chaperone tail 1 29062 29301
YP_009323579.1 NC_031930_p59 hypothetical protein phrog_7734 unknown function unknown function -1 52244 52579
YP_009323564.1 NC_031930_p44 hypothetical protein phrog_3012 unknown function unknown function -1 43895 44176
YP_009323573.1 NC_031930_p53 hypothetical protein phrog_6886 unknown function unknown function -1 49411 50151
YP_009323585.1 NC_031930_p65 hypothetical protein phrog_9514 unknown function unknown function 1 56058 56606
YP_009323553.1 NC_031930_p33 hypothetical protein phrog_2448 unknown function unknown function 1 34949 35911
YP_009323561.1 NC_031930_p41 hypothetical protein phrog_8098 unknown function unknown function -1 42423 43136
YP_009323550.1 NC_031930_p30 hypothetical protein phrog_6284 tail protein tail 1 29291 33181
YP_009323543.1 NC_031930_p23 major tail protein phrog_807 major tail protein with Ig-like domain tail 1 20065 21210
YP_009323524.1 NC_031930_p4 hypothetical protein phrog_7721 unknown function unknown function 1 4108 4527
YP_009323548.1 NC_031930_p28 hypothetical protein phrog_1180 tail assembly chaperone tail 1 28832 29062
YP_009323580.1 NC_031930_p60 hypothetical protein phrog_7942 unknown function unknown function -1 52566 53006
YP_009323541.1 NC_031930_p21 hypothetical protein phrog_27 tail completion or Neck1 protein connector 1 18926 19498
YP_009323542.1 NC_031930_p22 hypothetical protein phrog_5078 tail terminator connector 1 19548 20051
YP_009323528.1 NC_031930_p8 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 6966 9005
YP_009323537.1 NC_031930_p17 decorator protein D phrog_49 head decoration head and packaging 1 16708 17190
YP_009323578.1 NC_031930_p58 hypothetical protein phrog_7965 unknown function unknown function -1 51916 52257
YP_009323583.1 NC_031930_p63 hypothetical protein phrog_3199 unknown function unknown function 1 54667 55194
YP_009323568.1 NC_031930_p48 hypothetical protein phrog_9067 unknown function unknown function -1 45856 46050
YP_009323536.1 NC_031930_p16 head-tail preconnector protein phrog_53 head maturation protease head and packaging 1 15422 16693
YP_009323521.1 NC_031930_p1 hypothetical protein phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 643 966
YP_009323574.1 NC_031930_p54 hypothetical protein phrog_7587 unknown function unknown function -1 50347 50622
YP_009323572.1 NC_031930_p52 hypothetical protein phrog_8641 unknown function unknown function -1 48740 49414
YP_009323546.1 NC_031930_p26 distal tail protein phrog_1082 tail assembly protein tail 1 26310 27992
YP_009323566.1 NC_031930_p46 hypothetical protein phrog_6247 DNA topoisomerase DNA, RNA and nucleotide metabolism -1 44760 45647
YP_009323552.1 NC_031930_p32 hypothetical protein phrog_2448 unknown function unknown function 1 33931 34938
YP_009323529.1 NC_031930_p9 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 9007 9294
YP_009323539.1 NC_031930_p19 hypothetical protein phrog_7559 unknown function unknown function 1 18265 18558
YP_009323558.1 NC_031930_p38 hypothetical protein phrog_873 endolysin head and packaging 1 40734 41447
YP_009323540.1 NC_031930_p20 hypothetical protein phrog_4858 unknown function unknown function 1 18561 18926
YP_009323545.1 NC_031930_p25 tape measure phrog_2335 tail length tape measure protein tail 1 22072 26298
YP_009323582.1 NC_031930_p62 hypothetical protein phrog_26477 clamp loader of DNA polymerase DNA, RNA and nucleotide metabolism 1 54211 54648
YP_009323551.1 NC_031930_p31 tail fiber protein phrog_7049 tail fiber protein tail 1 33181 33921
YP_009323538.1 NC_031930_p18 major capsid protein phrog_29 major head protein head and packaging 1 17139 18203
YP_009323530.1 NC_031930_p10 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 9341 10816
YP_009323547.1 NC_031930_p27 tail assembly protein 2 phrog_778 tail assembly protein tail 1 28053 28820
YP_009323555.1 NC_031930_p35 hypothetical protein phrog_10924 unknown function unknown function 1 36959 38188
YP_009323569.1 NC_031930_p49 hypothetical protein phrog_8209 unknown function unknown function -1 46061 46879
YP_009323544.1 NC_031930_p24 tail assembly chaperone phrog_11703 tail length tape measure protein tail 1 21307 22010
YP_009323526.1 NC_031930_p6 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 4911 6248
YP_009323586.1 NC_031930_p66 hypothetical protein phrog_8635 unknown function unknown function 1 56603 56824