Genomic map of Salmonella phage 118970_sal2 (NC_031933)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031933
Definition
Salmonella phage 118970_sal2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Epseptimavirus.
DB of origin
REFSEQ
Length
114180
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
168
%GC
40.27
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009323787.1 NC_031933_p58 hypothetical protein phrog_5919 unknown function unknown function -1 29342 29506
YP_009323865.1 NC_031933_p136 hypothetical protein phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 81085 82881
YP_009323759.1 NC_031933_p30 hypothetical protein phrog_18933 unknown function unknown function -1 16873 16974
YP_009323885.1 NC_031933_p156 major capsid protein phrog_10 major head protein head and packaging -1 104865 106241
YP_009323830.1 NC_031933_p101 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 51448 52302
YP_009323856.1 NC_031933_p127 hypothetical protein phrog_323 transcriptional regulator, D5-like transcription regulation 1 71100 71867
YP_009323837.1 NC_031933_p108 hypothetical protein phrog_7953 unknown function unknown function 1 59858 60139
YP_009323840.1 NC_031933_p111 hypothetical protein phrog_2162 Sir2 (NAD-dependent deacetylase) DNA, RNA and nucleotide metabolism 1 60515 61366
YP_009323758.1 NC_031933_p29 hypothetical protein phrog_4979 unknown function unknown function -1 16374 16805
YP_009323762.1 NC_031933_p33 hypothetical protein phrog_7810 unknown function unknown function -1 17763 18131
YP_009323869.1 NC_031933_p140 hypothetical protein phrog_5592 unknown function unknown function 1 84663 84917
YP_009323884.1 NC_031933_p155 hypothetical protein phrog_442 head-tail adaptor connector -1 104292 104804
YP_009323780.1 NC_031933_p51 hypothetical protein phrog_2855 unknown function unknown function -1 26564 26836
YP_009323817.1 NC_031933_p88 hypothetical protein phrog_938 endolysin lysis -1 45292 45741
YP_009323897.1 NC_031933_p168 hypothetical protein phrog_6447 membrane protein moron, auxiliary metabolic gene and host takeover 1 113836 114081
YP_009323813.1 NC_031933_p84 hypothetical protein phrog_200 lipoprotein other -1 42454 43398
YP_009323732.1 NC_031933_p3 hypothetical protein phrog_4576 unknown function unknown function -1 1394 1786
YP_009323861.1 NC_031933_p132 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 77426 78778
YP_009323747.1 NC_031933_p18 hypothetical protein phrog_5799 unknown function unknown function -1 12513 12698
YP_009323737.1 NC_031933_p8 hypothetical protein phrog_3747 unknown function unknown function -1 4849 5100
YP_009323749.1 NC_031933_p20 hypothetical protein phrog_4605 unknown function unknown function -1 13142 13669
YP_009323797.1 NC_031933_p68 hypothetical protein phrog_18174 unknown function unknown function -1 33527 33685
YP_009323730.1 NC_031933_p1 hypothetical protein phrog_20937 unknown function unknown function 1 198 413
YP_009323792.1 NC_031933_p63 hypothetical protein phrog_15739 unknown function unknown function -1 31515 31733
YP_009323809.1 NC_031933_p80 hypothetical protein phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover -1 38697 39374
YP_009323866.1 NC_031933_p137 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 82885 83367
YP_009323763.1 NC_031933_p34 hypothetical protein phrog_246 NinI-like serine-threonine phosphatase other -1 18131 18994
YP_009323799.1 NC_031933_p70 hypothetical protein phrog_5473 unknown function unknown function -1 34987 35172
YP_009323786.1 NC_031933_p57 hypothetical protein phrog_4760 unknown function unknown function -1 28889 29182
YP_009323812.1 NC_031933_p83 hypothetical protein phrog_7894 unknown function unknown function 1 41706 42134
YP_009323827.1 NC_031933_p98 hypothetical protein phrog_13270 unknown function unknown function -1 50142 50411
YP_009323854.1 NC_031933_p125 DNA ligase phrog_3359 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 69154 70125
YP_009323896.1 NC_031933_p167 hypothetical protein phrog_5851 unknown function unknown function 1 113649 113843
YP_009323833.1 NC_031933_p104 ribonucleotide reductase of class Ia (aerobic) alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 54082 56412
YP_009323778.1 NC_031933_p49 hypothetical protein phrog_5486 unknown function unknown function -1 25853 26272
YP_009323811.1 NC_031933_p82 hypothetical protein phrog_8119 unknown function unknown function 1 40697 41683
YP_009323796.1 NC_031933_p67 hypothetical protein phrog_6221 unknown function unknown function -1 33176 33340
YP_009323872.1 NC_031933_p143 tail fibers protein phrog_5481 tail fiber protein tail -1 86938 90021
YP_009323836.1 NC_031933_p107 ribonucleotide reductase of class III (anaerobic) large subunit phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 57885 59759
YP_009323740.1 NC_031933_p11 hypothetical protein phrog_6741 unknown function unknown function 1 7642 8136
YP_009323782.1 NC_031933_p53 hypothetical protein phrog_1235 unknown function unknown function -1 27367 27552
YP_009323832.1 NC_031933_p103 ribonucleotide reductase of class Ia (aerobic) beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 52829 53974
YP_009323816.1 NC_031933_p87 hypothetical protein phrog_5077 unknown function unknown function -1 45053 45223
YP_009323841.1 NC_031933_p112 hypothetical protein phrog_5116 unknown function unknown function 1 61344 61502
YP_009323779.1 NC_031933_p50 hypothetical protein phrog_4821 unknown function unknown function -1 26265 26564
YP_009323892.1 NC_031933_p163 hypothetical protein phrog_4815 receptor binding tail protein tail -1 110952 112733
YP_009323875.1 NC_031933_p146 tail length tape-measure protein phrog_31 central tail fiber J tail -1 92507 95356
YP_009323824.1 NC_031933_p95 hypothetical protein phrog_4516 unknown function unknown function -1 48712 49227
YP_009323789.1 NC_031933_p60 hypothetical protein phrog_2210 unknown function unknown function -1 29983 30183
YP_009323733.1 NC_031933_p4 hypothetical protein phrog_18783 unknown function unknown function -1 1819 2097
YP_009323810.1 NC_031933_p81 hypothetical protein phrog_3462 nicotinamide-nucleotide adenylyltransferase moron, auxiliary metabolic gene and host takeover -1 39376 40431
YP_009323845.1 NC_031933_p116 hypothetical protein phrog_2502 unknown function unknown function 1 62618 63013
YP_009323736.1 NC_031933_p7 hypothetical protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 4208 4624
YP_009323768.1 NC_031933_p39 hypothetical protein phrog_465 endolysin lysis -1 20737 21150
YP_009323794.1 NC_031933_p65 hypothetical protein phrog_13931 unknown function unknown function -1 32617 32760
YP_009323849.1 NC_031933_p120 hypothetical protein phrog_643 transcriptional regulator transcription regulation 1 67402 67665
YP_009323806.1 NC_031933_p77 hypothetical protein phrog_9447 unknown function unknown function -1 37529 37861
YP_009323781.1 NC_031933_p52 hypothetical protein phrog_5021 unknown function unknown function -1 26913 27308
YP_009323893.1 NC_031933_p164 hypothetical protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover 1 112817 113083
YP_009323886.1 NC_031933_p157 capsid and scaffold protein phrog_80 head maturation protease head and packaging -1 106259 106891
YP_009323818.1 NC_031933_p89 hypothetical protein phrog_1479 unknown function unknown function -1 45747 46064
YP_009323800.1 NC_031933_p71 hypothetical protein phrog_7042 unknown function unknown function -1 35352 35543
YP_009323771.1 NC_031933_p42 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other -1 22572 23324
YP_009323772.1 NC_031933_p43 hypothetical protein phrog_812 Rz-like spanin lysis -1 23324 23677
YP_009323873.1 NC_031933_p144 hypothetical protein phrog_1084 unknown function unknown function -1 90021 90443
YP_009323783.1 NC_031933_p54 hypothetical protein phrog_6828 unknown function unknown function -1 27617 27703
YP_009323853.1 NC_031933_p124 hypothetical protein phrog_8267 unknown function unknown function 1 68961 69161
YP_009323801.1 NC_031933_p72 hypothetical protein phrog_8408 unknown function unknown function -1 35540 35764
YP_009323760.1 NC_031933_p31 hypothetical protein phrog_547 phosphoesterase other -1 16967 17557
YP_009323882.1 NC_031933_p153 hypothetical protein phrog_3907 tail terminator connector -1 103036 103521
YP_009323788.1 NC_031933_p59 hypothetical protein phrog_5598 unknown function unknown function -1 29499 29720
YP_009323881.1 NC_031933_p152 major tail protein phrog_3575 major tail protein tail -1 101600 103009
YP_009323819.1 NC_031933_p90 tail fiber protein phrog_1491 tail fiber protein tail -1 46504 47142
YP_009323752.1 NC_031933_p23 hypothetical protein phrog_5967 unknown function unknown function -1 14494 14694
YP_009323731.1 NC_031933_p2 hypothetical protein phrog_415 polynucleotide kinase other -1 572 1306
YP_009323839.1 NC_031933_p110 hypothetical protein phrog_5827 unknown function unknown function 1 60321 60515
YP_009323815.1 NC_031933_p86 hypothetical protein phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism -1 44610 45053
YP_009323848.1 NC_031933_p119 hypothetical protein phrog_3611 helicase DNA, RNA and nucleotide metabolism 1 66705 67409
YP_009323823.1 NC_031933_p94 tail length tape-measure protein phrog_2380 unknown function unknown function -1 48435 48650
YP_009323814.1 NC_031933_p85 hypothetical protein phrog_11609 unknown function unknown function -1 43410 43610
YP_009323738.1 NC_031933_p9 hypothetical protein phrog_4718 unknown function unknown function -1 5266 5484
YP_009323859.1 NC_031933_p130 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 74372 76939
YP_009323774.1 NC_031933_p45 hypothetical protein phrog_4243 unknown function unknown function -1 24014 24712
YP_009323734.1 NC_031933_p5 hypothetical protein phrog_1745 DNA transfer protein other -1 2150 3814
YP_009323828.1 NC_031933_p99 hypothetical protein phrog_1040 peptidase HslV family other -1 50414 50992
YP_009323754.1 NC_031933_p25 hypothetical protein phrog_4804 unknown function unknown function -1 15117 15362
YP_009323767.1 NC_031933_p38 hypothetical protein phrog_5944 unknown function unknown function -1 20245 20661
YP_009323843.1 NC_031933_p114 hypothetical protein phrog_1818 unknown function unknown function 1 61662 62177
YP_009323891.1 NC_031933_p162 hypothetical protein phrog_3802 terminase small subunit head and packaging -1 110459 110941
YP_009323761.1 NC_031933_p32 hypothetical protein phrog_6073 Rz-like spanin lysis -1 17557 17763
YP_009323764.1 NC_031933_p35 hypothetical protein phrog_6798 unknown function unknown function -1 18994 19374
YP_009323753.1 NC_031933_p24 hypothetical protein phrog_4731 unknown function unknown function -1 14795 15127
YP_009323756.1 NC_031933_p27 hypothetical protein phrog_13127 unknown function unknown function -1 15637 16044
YP_009323743.1 NC_031933_p14 hypothetical protein phrog_3474 unknown function unknown function 1 8908 9108
YP_009323742.1 NC_031933_p13 hypothetical protein phrog_4379 unknown function unknown function 1 8567 8911
YP_009323791.1 NC_031933_p62 hypothetical protein phrog_11405 unknown function unknown function -1 31231 31410
YP_009323888.1 NC_031933_p159 portal (connector) protein phrog_12 portal protein head and packaging -1 107374 108591
YP_009323877.1 NC_031933_p148 tail length tape-measure protein phrog_3779 tail length tape measure protein tail -1 96076 99783
YP_009323889.1 NC_031933_p160 hypothetical protein phrog_3497 unknown function unknown function -1 108591 109028
YP_009323741.1 NC_031933_p12 hypothetical protein phrog_4227 endonuclease nicking abasic sites generated by host uracil glycosylase Ung moron, auxiliary metabolic gene and host takeover 1 8245 8457
YP_009323822.1 NC_031933_p93 hypothetical protein phrog_4586 unknown function unknown function -1 48181 48393
YP_009323864.1 NC_031933_p135 hypothetical protein phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 80085 81062
YP_009323739.1 NC_031933_p10 hypothetical protein phrog_4263 unknown function unknown function 1 6577 7578
YP_009323858.1 NC_031933_p129 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 73419 74309
YP_009323851.1 NC_031933_p122 hypothetical protein phrog_3696 unknown function unknown function 1 68220 68516
YP_009323871.1 NC_031933_p142 hypothetical protein phrog_12321 tail fiber protein tail -1 86051 86938
YP_009323790.1 NC_031933_p61 hypothetical protein phrog_14410 unknown function unknown function -1 30842 31045
YP_009323868.1 NC_031933_p139 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 84239 84685
YP_009323755.1 NC_031933_p26 hypothetical protein phrog_4984 unknown function unknown function -1 15359 15640
YP_009323805.1 NC_031933_p76 hypothetical protein phrog_5441 unknown function unknown function -1 37222 37344
YP_009323748.1 NC_031933_p19 hypothetical protein phrog_6021 unknown function unknown function -1 12698 12931
YP_009323862.1 NC_031933_p133 hypothetical protein phrog_4258 unknown function unknown function 1 78917 79279
YP_009323757.1 NC_031933_p28 hypothetical protein phrog_3880 unknown function unknown function -1 16044 16295
YP_009323890.1 NC_031933_p161 terminase large subunit phrog_2 terminase large subunit head and packaging -1 109143 110459
YP_009323804.1 NC_031933_p75 hypothetical protein phrog_5153 unknown function unknown function -1 37002 37208
YP_009323852.1 NC_031933_p123 hypothetical protein phrog_4053 transcriptional regulator transcription regulation 1 68567 68875
YP_009323880.1 NC_031933_p151 tail fibers protein phrog_3889 base plate tail tube protein tail -1 100696 101595
YP_009323775.1 NC_031933_p46 hypothetical protein phrog_5468 unknown function unknown function -1 24858 25247
YP_009323844.1 NC_031933_p115 hypothetical protein phrog_2502 unknown function unknown function 1 62216 62608
YP_009323795.1 NC_031933_p66 hypothetical protein phrog_6053 unknown function unknown function -1 32760 33077
YP_009323876.1 NC_031933_p147 hypothetical protein phrog_1302 distal tail protein tail -1 95353 95967
YP_009323894.1 NC_031933_p165 hypothetical protein phrog_16810 unknown function unknown function 1 113158 113472
YP_009323838.1 NC_031933_p109 hypothetical protein phrog_5236 unknown function unknown function 1 60149 60352
YP_009323846.1 NC_031933_p117 hypothetical protein phrog_3712 replication origin binding DNA, RNA and nucleotide metabolism 1 63630 66419
YP_009323847.1 NC_031933_p118 hypothetical protein phrog_5291 unknown function unknown function 1 66403 66636
YP_009323867.1 NC_031933_p138 ribonuclease H phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 83367 84242
YP_009323850.1 NC_031933_p121 hypothetical protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism 1 67773 68183
YP_009323820.1 NC_031933_p91 hypothetical protein phrog_5252 unknown function unknown function -1 47196 47378
YP_009323746.1 NC_031933_p17 hypothetical protein phrog_5271 unknown function unknown function -1 11902 12513
YP_009323751.1 NC_031933_p22 hypothetical protein phrog_4215 unknown function unknown function -1 14030 14497
YP_009323807.1 NC_031933_p78 hypothetical protein phrog_6060 anti-termination protein Q-like transcription regulation -1 37863 38048
YP_009323842.1 NC_031933_p113 hypothetical protein phrog_11166 unknown function unknown function 1 61499 61684
YP_009323776.1 NC_031933_p47 hypothetical protein phrog_5265 unknown function unknown function -1 25322 25606
YP_009323785.1 NC_031933_p56 hypothetical protein phrog_19031 unknown function unknown function -1 28457 28633
YP_009323803.1 NC_031933_p74 hypothetical protein phrog_4551 unknown function unknown function -1 36636 36911
YP_009323857.1 NC_031933_p128 hypothetical protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 71956 73422
YP_009323784.1 NC_031933_p55 pyruvate formate-lyase phrog_1209 unknown function unknown function -1 27992 28360
YP_009323895.1 NC_031933_p166 hypothetical protein phrog_6369 unknown function unknown function 1 113545 113649
YP_009323870.1 NC_031933_p141 tail fiber protein phrog_14572 tail fiber protein tail -1 84955 86100
YP_009323745.1 NC_031933_p16 hypothetical protein phrog_8583 unknown function unknown function -1 11012 11902
YP_009323793.1 NC_031933_p64 hypothetical protein phrog_7572 unknown function unknown function -1 32174 32527
YP_009323878.1 NC_031933_p149 hypothetical protein phrog_3914 tail assembly chaperone tail -1 99865 100212
YP_009323750.1 NC_031933_p21 capsid and scaffold protein phrog_4905 unknown function unknown function -1 13705 14046
YP_009323773.1 NC_031933_p44 hypothetical protein phrog_739 Rz-like spanin lysis -1 23608 24057
YP_009323766.1 NC_031933_p37 hypothetical protein phrog_4328 unknown function unknown function -1 19759 20169
YP_009323735.1 NC_031933_p6 hypothetical protein phrog_4820 membrane protein moron, auxiliary metabolic gene and host takeover -1 3923 4150
YP_009323863.1 NC_031933_p134 hypothetical protein phrog_1607 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 79272 80045
YP_009323887.1 NC_031933_p158 neck whiskers protein phrog_2973 Hoc-like head decoration head and packaging -1 106895 107377
YP_009323798.1 NC_031933_p69 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 34329 34883
YP_009323883.1 NC_031933_p154 hypothetical protein phrog_3725 tail completion or Neck1 protein connector -1 103525 104292
YP_009323874.1 NC_031933_p145 tail fibers protein phrog_3890 straight fibre tail protein tail -1 90449 92506
YP_009323860.1 NC_031933_p131 hypothetical protein phrog_4386 unknown function unknown function 1 76932 77429
YP_009323826.1 NC_031933_p97 ribonuclease HI phrog_531 Rnase H DNA, RNA and nucleotide metabolism -1 49666 50142
YP_009323808.1 NC_031933_p79 hypothetical protein phrog_6894 unknown function unknown function -1 38294 38590
YP_009323879.1 NC_031933_p150 hypothetical protein phrog_313 Tail assembly chaperone tail -1 100295 100699
YP_009323821.1 NC_031933_p92 hypothetical protein phrog_255 exonuclease DNA, RNA and nucleotide metabolism -1 47449 48150
YP_009323769.1 NC_031933_p40 hypothetical protein phrog_860 holin lysis -1 21147 21803
YP_009323802.1 NC_031933_p73 hypothetical protein phrog_5876 unknown function unknown function -1 35815 36087
YP_009323770.1 NC_031933_p41 ATP-dependent Clp protease proteolytic subunit phrog_1827 ATP-dependent protease other -1 21960 22559
YP_009323835.1 NC_031933_p106 hypothetical protein phrog_170 PhoH-like phosphate starvation-inducible other -1 56780 57532
YP_009323834.1 NC_031933_p105 hypothetical protein phrog_5357 tail length tape measure protein tail -1 56536 56778
YP_009323831.1 NC_031933_p102 hypothetical protein phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 52299 52829
YP_009323855.1 NC_031933_p126 DNA ligase phrog_3498 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 70328 71107
YP_009323744.1 NC_031933_p15 hypothetical protein phrog_12351 unknown function unknown function 1 9232 9471
YP_009323777.1 NC_031933_p48 hypothetical protein phrog_5792 unknown function unknown function -1 25603 25899
YP_009323829.1 NC_031933_p100 hypothetical protein phrog_2470 membrane protein moron, auxiliary metabolic gene and host takeover -1 51091 51444
YP_009323765.1 NC_031933_p36 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 19476 19766
YP_009323825.1 NC_031933_p96 hypothetical protein phrog_4593 unknown function unknown function -1 49311 49550