Genomic map of Gordonia phage GAL1 (NC_031936)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031936
Definition
Gordonia phage GAL1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Galunavirus; Gordonia virus GAL1.
DB of origin
REFSEQ
Length
49979
Host Name
Gordonia alkanivorans
Host domain
Bacteria
Is prophage?
undef
Number of proteins
82
%GC
63.54
Number of singletons
8
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009324453.1 NC_031936_p61 hypothetical protein phrog_26835 unknown function unknown function 1 40090 40473
YP_009324422.1 NC_031936_p30 hypothetical protein phrog_18370 unknown function unknown function 1 26783 27679
YP_009324446.1 NC_031936_p54 hypothetical protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 37553 37900
YP_009324395.1 NC_031936_p3 hypothetical protein phrog_32749 unknown function unknown function 1 1300 1620
YP_009324416.1 NC_031936_p24 hypothetical protein phrog_8672 unknown function unknown function 1 20564 20953
YP_009324408.1 NC_031936_p16 tail assembly protein phrog_2624 tail assembly chaperone tail 1 10786 11669
YP_009324423.1 NC_031936_p31 integrase phrog_1 integrase integration and excision 1 28103 29317
YP_009324472.1 NC_031936_p80 hypothetical protein phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48654 49394
YP_009324468.1 NC_031936_p76 hypothetical protein singleton unknown function unknown function 1 47220 47414
YP_009324412.1 NC_031936_p20 hypothetical protein phrog_110 minor tail protein tail 1 16985 18748
YP_009324458.1 NC_031936_p66 hypothetical protein phrog_2164 unknown function unknown function 1 42130 42576
YP_009324399.1 NC_031936_p7 hypothetical protein phrog_4708 head scaffolding protein head and packaging 1 5721 6392
YP_009324415.1 NC_031936_p23 holin phrog_443 holin lysis 1 20309 20548
YP_009324435.1 NC_031936_p43 hypothetical protein phrog_9213 unknown function unknown function 1 33971 34180
YP_009324474.1 NC_031936_p82 hypothetical protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49576 49935
YP_009324428.1 NC_031936_p36 hypothetical protein singleton unknown function unknown function 1 31738 31854
YP_009324424.1 NC_031936_p32 hypothetical protein singleton unknown function unknown function 1 29450 29785
YP_009324440.1 NC_031936_p48 hypothetical protein phrog_35585 unknown function unknown function 1 35018 35191
YP_009324459.1 NC_031936_p67 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 42573 43475
YP_009324448.1 NC_031936_p56 DNA methyltransferase phrog_67 DNA methyltransferase other 1 38270 38929
YP_009324398.1 NC_031936_p6 hypothetical protein phrog_1522 head maturation protease head and packaging 1 4710 5651
YP_009324402.1 NC_031936_p10 hypothetical protein phrog_6587 head-tail connector protein connector 1 7852 8169
YP_009324462.1 NC_031936_p70 hypothetical protein phrog_27870 unknown function unknown function 1 44202 44411
YP_009324401.1 NC_031936_p9 hypothetical protein phrog_29 major head protein head and packaging 1 6815 7852
YP_009324444.1 NC_031936_p52 hypothetical protein singleton unknown function unknown function 1 36181 36321
YP_009324465.1 NC_031936_p73 hypothetical protein phrog_24257 unknown function unknown function 1 45602 45817
YP_009324439.1 NC_031936_p47 hypothetical protein phrog_23212 unknown function unknown function 1 34770 35021
YP_009324463.1 NC_031936_p71 hypothetical protein phrog_236 nucleotide kinase other 1 44515 45402
YP_009324426.1 NC_031936_p34 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 30600 31448
YP_009324457.1 NC_031936_p65 hypothetical protein singleton unknown function unknown function 1 42011 42133
YP_009324434.1 NC_031936_p42 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 33753 33974
YP_009324437.1 NC_031936_p45 hypothetical protein phrog_7723 unknown function unknown function 1 34356 34607
YP_009324394.1 NC_031936_p2 hypothetical protein phrog_226 minor tail protein tail 1 720 1169
YP_009324397.1 NC_031936_p5 portal protein phrog_104 portal protein head and packaging 1 3245 4624
YP_009324471.1 NC_031936_p79 hypothetical protein phrog_19157 unknown function unknown function 1 48135 48575
YP_009324443.1 NC_031936_p51 hypothetical protein phrog_23738 unknown function unknown function 1 35588 36184
YP_009324432.1 NC_031936_p40 hypothetical protein phrog_17603 unknown function unknown function 1 33170 33433
YP_009324418.1 NC_031936_p26 hypothetical protein phrog_102 endolysin lysis 1 21339 22043
YP_009324451.1 NC_031936_p59 hypothetical protein phrog_33915 unknown function unknown function 1 39705 39854
YP_009324455.1 NC_031936_p63 hypothetical protein phrog_31992 unknown function unknown function 1 40966 41148
YP_009324473.1 NC_031936_p81 hypothetical protein phrog_6439 unknown function unknown function 1 49391 49576
YP_009324470.1 NC_031936_p78 hypothetical protein phrog_24399 unknown function unknown function 1 47825 48118
YP_009324405.1 NC_031936_p13 hypothetical protein phrog_5210 neck protein connector 1 8895 9233
YP_009324452.1 NC_031936_p60 hypothetical protein phrog_16479 unknown function unknown function 1 39851 40093
YP_009324445.1 NC_031936_p53 WhiB family regulatory protein phrog_1590 unknown function unknown function 1 36318 37556
YP_009324414.1 NC_031936_p22 lysin phrog_2998 endolysin lysis 1 19182 20282
YP_009324450.1 NC_031936_p58 hypothetical protein phrog_780 unknown function unknown function 1 39448 39708
YP_009324411.1 NC_031936_p19 hypothetical protein phrog_106 minor tail protein tail 1 16068 16979
YP_009324429.1 NC_031936_p37 hypothetical protein singleton unknown function unknown function 1 31854 31991
YP_009324461.1 NC_031936_p69 hypothetical protein phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 43840 44205
YP_009324430.1 NC_031936_p38 hypothetical protein phrog_12920 unknown function unknown function 1 32000 32320
YP_009324410.1 NC_031936_p18 tape measure protein phrog_4197 tail length tape measure protein tail 1 11671 16068
YP_009324403.1 NC_031936_p11 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8169 8561
YP_009324447.1 NC_031936_p55 hypothetical protein singleton unknown function unknown function 1 38002 38268
YP_009324467.1 NC_031936_p75 hypothetical protein phrog_908 unknown function unknown function 1 46097 46876
YP_009324404.1 NC_031936_p12 hypothetical protein phrog_5309 head-tail adaptor connector 1 8558 8902
YP_009324409.1 NC_031936_p17 tail assembly protein phrog_33196 tail assembly chaperone tail 1 10786 11244
YP_009324400.1 NC_031936_p8 hypothetical protein phrog_3583 head decoration head and packaging 1 6396 6800
YP_009324469.1 NC_031936_p77 hypothetical protein phrog_6676 unknown function unknown function 1 47436 47828
YP_009324421.1 NC_031936_p29 hypothetical protein phrog_31597 unknown function unknown function 1 24641 26770
YP_009324419.1 NC_031936_p27 hypothetical protein phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism 1 22156 22695
YP_009324425.1 NC_031936_p33 hypothetical protein phrog_19579 transcriptional regulator transcription regulation -1 29687 30364
YP_009324417.1 NC_031936_p25 hypothetical protein phrog_11860 unknown function unknown function 1 20950 21339
YP_009324393.1 NC_031936_p1 hypothetical protein singleton unknown function unknown function 1 51 593
YP_009324420.1 NC_031936_p28 hypothetical protein phrog_2689 minor tail protein tail 1 22722 24629
YP_009324436.1 NC_031936_p44 hypothetical protein phrog_35290 unknown function unknown function 1 34177 34359
YP_009324466.1 NC_031936_p74 hypothetical protein phrog_24327 unknown function unknown function 1 45814 46038
YP_009324396.1 NC_031936_p4 large terminase subunit phrog_9 terminase large subunit head and packaging 1 1617 3242
YP_009324454.1 NC_031936_p62 hypothetical protein phrog_1138 unknown function unknown function 1 40466 40969
YP_009324441.1 NC_031936_p49 hypothetical protein phrog_31304 unknown function unknown function 1 35188 35370
YP_009324460.1 NC_031936_p68 hypothetical protein phrog_4296 unknown function unknown function 1 43472 43843
YP_009324442.1 NC_031936_p50 hypothetical protein phrog_26188 unknown function unknown function 1 35370 35588
YP_009324407.1 NC_031936_p15 major tail protein phrog_476 major tail protein tail 1 9773 10699
YP_009324438.1 NC_031936_p46 hypothetical protein phrog_1581 unknown function unknown function 1 34604 34783
YP_009324464.1 NC_031936_p72 hypothetical protein phrog_31933 unknown function unknown function 1 45399 45611
YP_009324433.1 NC_031936_p41 DNA binding protein phrog_3 transcriptional repressor transcription regulation 1 33430 33756
YP_009324449.1 NC_031936_p57 hypothetical protein phrog_34595 unknown function unknown function 1 38966 39451
YP_009324427.1 NC_031936_p35 hypothetical protein phrog_3642 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 31502 31741
YP_009324456.1 NC_031936_p64 DNA methyltransferase phrog_111 DNA methyltransferase other 1 41145 41696
YP_009324431.1 NC_031936_p39 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 32334 33173
YP_009324406.1 NC_031936_p14 hypothetical protein phrog_32820 unknown function unknown function 1 9230 9691
YP_009324413.1 NC_031936_p21 hypothetical protein phrog_17401 unknown function unknown function 1 18745 19113