Genomic map of Escherichia phage LM33_P1 (NC_031937)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031937
Definition
Escherichia phage LM33_P1 genome assembly, chromosome: I.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Kayfunavirus; Escherichia virus LM33P1.
DB of origin
REFSEQ
Length
38979
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
50.18
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009324490.1 NC_031937_p16 hypothetical protein phrog_2585 nucleotide kinase other 1 8324 8662
YP_009324501.1 NC_031937_p27 Phage HNS binding protein phrog_1334 unknown function unknown function 1 15966 16175
YP_009324493.1 NC_031937_p19 T7-like phage endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 9682 10101
YP_009324484.1 NC_031937_p10 hypothetical protein phrog_8082 unknown function unknown function 1 5863 6078
YP_009324507.1 NC_031937_p33 Phage collar / T7-like phage head-to-tail joining protein phrog_449 head-tail adaptor connector 1 18440 20008
YP_009324510.1 NC_031937_p36 hypothetical protein phrog_7473 unknown function unknown function 1 22221 22427
YP_009324487.1 NC_031937_p13 DNA ligase, phage-associated phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 6697 7785
YP_009324504.1 NC_031937_p30 adsorption phrog_1391 unknown function unknown function 1 17536 17760
YP_009324496.1 NC_031937_p22 T7-like phage primase/helicase protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 11197 12897
YP_009324503.1 NC_031937_p29 hypothetical protein phrog_1447 unknown function unknown function 1 17249 17521
YP_009324513.1 NC_031937_p39 Phage tail fiber protein / T7-like tail tubular protein B phrog_457 tail protein tail 1 23390 25747
YP_009324515.1 NC_031937_p41 Phage internal (core) protein phrog_805 internal virion protein head and packaging 1 26279 26866
YP_009324482.1 NC_031937_p8 T7-like phage DNA-directed RNA polymerase phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 4920 5606
YP_009324520.1 NC_031937_p46 DNA packaging protein A, T7-like gp18 phrog_1351 terminase small subunit head and packaging 1 35633 35896
YP_009324498.1 NC_031937_p24 T7-like phage DNA Polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 13168 15339
YP_009324485.1 NC_031937_p11 hypothetical protein phrog_4383 unknown function unknown function 1 6250 6429
YP_009324497.1 NC_031937_p23 hypothetical protein phrog_13039 unknown function unknown function 1 12940 13104
YP_009324492.1 NC_031937_p18 T7-like phage ssDNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8957 9649
YP_009324476.1 NC_031937_p2 hypothetical protein phrog_10124 unknown function unknown function 1 783 1037
YP_009324509.1 NC_031937_p35 Phage capsid and scaffold phrog_267 major head protein head and packaging 1 21115 22164
YP_009324481.1 NC_031937_p7 DNA-directed RNA polymerase phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 2925 4892
YP_009324506.1 NC_031937_p32 hypothetical protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 18180 18428
YP_009324489.1 NC_031937_p15 hypothetical protein phrog_1777 unknown function unknown function 1 8070 8324
YP_009324499.1 NC_031937_p25 hypothetical protein phrog_1872 endonuclease DNA, RNA and nucleotide metabolism 1 15350 15658
YP_009324486.1 NC_031937_p12 dGTP triphosphohydrolase inhibitor phrog_2949 dGTPase inhibitor; target for F exclusion other 1 6434 6697
YP_009324495.1 NC_031937_p21 Phage lysin, N-acetylmuramoyl-L-alanine amidase phrog_822 amidase lysis 1 10582 11040
YP_009324512.1 NC_031937_p38 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 23153 23380
YP_009324517.1 NC_031937_p43 Phage internal (core) protein phrog_342 internal virion protein with endolysin domain head and packaging 1 29165 33052
YP_009324505.1 NC_031937_p31 hypothetical protein phrog_2746 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 17765 18187
YP_009324488.1 NC_031937_p14 hypothetical protein phrog_36761 unknown function unknown function 1 7782 7961
YP_009324478.1 NC_031937_p4 hypothetical protein phrog_32657 unknown function unknown function 1 1837 2064
YP_009324502.1 NC_031937_p28 phage exonuclease, phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 16172 17038
YP_009324522.1 NC_031937_p48 Phage DNA packaging phrog_38 terminase large subunit head and packaging 1 36439 38202
YP_009324519.1 NC_031937_p45 Phage holin, class II phrog_920 holin lysis 1 35442 35636
YP_009324477.1 NC_031937_p3 Phage protein kinase phrog_2568 ocr-like anti-restriction moron, auxiliary metabolic gene and host takeover 1 1121 1624
YP_009324483.1 NC_031937_p9 hypothetical protein phrog_28104 unknown function unknown function 1 5622 5852
YP_009324523.1 NC_031937_p49 hypothetical protein phrog_2193 unknown function unknown function 1 38500 38658
YP_009324514.1 NC_031937_p40 Phage internal (core) protein phrog_308 internal virion protein head and packaging 1 25824 26294
YP_009324494.1 NC_031937_p20 hypothetical protein phrog_16385 unknown function unknown function 1 10101 10592
YP_009324500.1 NC_031937_p26 Phage HNS binding protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 15670 15969
YP_009324508.1 NC_031937_p34 Phage capsid and scaffold phrog_1052 head assembly head and packaging 1 20103 20987
YP_009324491.1 NC_031937_p17 Host RNA polymerase inhibitor, T7-like gp2 phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 8741 8899
YP_009324511.1 NC_031937_p37 Phage tail fiber protein / T7-like tail tubular protein A phrog_446 tail protein tail 1 22587 23153
YP_009324479.1 NC_031937_p5 hypothetical protein phrog_2385 unknown function unknown function 1 2298 2501
YP_009324521.1 NC_031937_p47 Phage endopeptidase Rz phrog_1327 Rz-like spanin lysis 1 35993 36442
YP_009324516.1 NC_031937_p42 Phage internal (core) protein phrog_1339 internal virion protein head and packaging 1 26878 29160
YP_009324518.1 NC_031937_p44 Phage tail fibers phrog_27367 tail fiber protein tail 1 33117 35297
YP_009324475.1 NC_031937_p1 Hypothetical protein phrog_30192 unknown function unknown function 1 361 579
YP_009324480.1 NC_031937_p6 hypothetical protein phrog_7066 unknown function unknown function 1 2501 2827