| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031938 |
Definition |
Flavobacterium phage Fpv6, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
42820 |
Host Name |
Flavobacterium psychrophilum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
31.98 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009324530.1 | NC_031938_p7 | structural protein | phrog_8914 | virion structural protein | head and packaging | 1 | 4616 | 5368 |
| YP_009324548.1 | NC_031938_p25 | hypothetical protein | phrog_13145 | unknown function | unknown function | 1 | 24316 | 24696 |
| YP_009324540.1 | NC_031938_p17 | hypothetical protein | phrog_1259 | baseplate hub subunit and tail lysozyme | tail | 1 | 18835 | 19371 |
| YP_009324567.1 | NC_031938_p44 | hypothetical protein | phrog_12515 | unknown function | unknown function | 1 | 33800 | 34105 |
| YP_009324581.1 | NC_031938_p58 | hypothetical protein | phrog_14563 | unknown function | unknown function | 1 | 42147 | 42737 |
| YP_009324547.1 | NC_031938_p24 | hypothetical protein | phrog_4632 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 23814 | 24353 |
| YP_009324527.1 | NC_031938_p4 | hypothetical protein | phrog_6195 | tail protein | tail | 1 | 3330 | 3764 |
| YP_009324543.1 | NC_031938_p20 | hypothetical protein | phrog_14584 | unknown function | unknown function | 1 | 20650 | 21225 |
| YP_009324533.1 | NC_031938_p10 | hypothetical protein | phrog_13115 | unknown function | unknown function | 1 | 10578 | 10811 |
| YP_009324525.1 | NC_031938_p2 | structural protein | phrog_7231 | virion structural protein | head and packaging | 1 | 1079 | 2128 |
| YP_009324571.1 | NC_031938_p48 | hypothetical protein | phrog_452 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 36216 | 36599 |
| YP_009324531.1 | NC_031938_p8 | structural protein | phrog_14476 | virion structural protein | head and packaging | 1 | 5504 | 8815 |
| YP_009324566.1 | NC_031938_p43 | hypothetical protein | phrog_13210 | unknown function | unknown function | 1 | 33192 | 33803 |
| YP_009324539.1 | NC_031938_p16 | hypothetical protein | phrog_14595 | unknown function | unknown function | 1 | 18189 | 18842 |
| YP_009324570.1 | NC_031938_p47 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 34987 | 36207 |
| YP_009324563.1 | NC_031938_p40 | conjugal transfer protein | phrog_799 | DNA methyltransferase | other | 1 | 31877 | 32308 |
| YP_009324545.1 | NC_031938_p22 | hypothetical protein | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 22009 | 22806 |
| YP_009324553.1 | NC_031938_p30 | hypothetical protein | phrog_14663 | unknown function | unknown function | 1 | 26392 | 26697 |
| YP_009324565.1 | NC_031938_p42 | hypothetical protein | phrog_14426 | unknown function | unknown function | 1 | 32842 | 33189 |
| YP_009324544.1 | NC_031938_p21 | hypothetical protein | phrog_4763 | unknown function | unknown function | 1 | 21295 | 22008 |
| YP_009324526.1 | NC_031938_p3 | hypothetical protein | phrog_8189 | unknown function | unknown function | 1 | 2201 | 3337 |
| YP_009324550.1 | NC_031938_p27 | hypothetical protein | phrog_5443 | unknown function | unknown function | 1 | 25072 | 25356 |
| YP_009324524.1 | NC_031938_p1 | hypothetical protein | phrog_7970 | virion structural protein | head and packaging | 1 | 78 | 1052 |
| YP_009324569.1 | NC_031938_p46 | DNA packaging protein | phrog_606 | terminase small subunit | head and packaging | 1 | 34498 | 34983 |
| YP_009324561.1 | NC_031938_p38 | hypothetical protein | phrog_116 | DNA methyltransferase | other | 1 | 30479 | 31546 |
| YP_009324557.1 | NC_031938_p34 | hypothetical protein | phrog_13960 | unknown function | unknown function | 1 | 28789 | 29106 |
| YP_009324577.1 | NC_031938_p54 | hypothetical protein | phrog_9957 | unknown function | unknown function | 1 | 38569 | 38940 |
| YP_009324537.1 | NC_031938_p14 | hypothetical protein | phrog_12180 | unknown function | unknown function | 1 | 16800 | 17756 |
| YP_009324552.1 | NC_031938_p29 | hypothetical protein | phrog_7108 | unknown function | unknown function | 1 | 26034 | 26504 |
| YP_009324546.1 | NC_031938_p23 | hypothetical protein | phrog_14628 | unknown function | unknown function | 1 | 22808 | 23848 |
| YP_009324578.1 | NC_031938_p55 | hypothetical protein | phrog_13579 | unknown function | unknown function | 1 | 39014 | 39463 |
| YP_009324538.1 | NC_031938_p15 | hypothetical protein | phrog_14274 | unknown function | unknown function | 1 | 17773 | 18204 |
| YP_009324580.1 | NC_031938_p57 | hypothetical protein | phrog_7376 | portal protein | head and packaging | 1 | 40413 | 42128 |
| YP_009324529.1 | NC_031938_p6 | hypothetical protein | phrog_13297 | unknown function | unknown function | 1 | 4349 | 4612 |
| YP_009324564.1 | NC_031938_p41 | hypothetical protein | phrog_14413 | unknown function | unknown function | 1 | 32499 | 32996 |
| YP_009324551.1 | NC_031938_p28 | hypothetical protein | phrog_9513 | unknown function | unknown function | 1 | 25382 | 26002 |
| YP_009324535.1 | NC_031938_p12 | hypothetical protein | phrog_12000 | unknown function | unknown function | 1 | 13350 | 14546 |
| YP_009324574.1 | NC_031938_p51 | hypothetical protein | phrog_14160 | unknown function | unknown function | 1 | 37569 | 37829 |
| YP_009324558.1 | NC_031938_p35 | hypothetical protein | phrog_14020 | unknown function | unknown function | 1 | 29106 | 29354 |
| YP_009324576.1 | NC_031938_p53 | hypothetical protein | phrog_13886 | unknown function | unknown function | 1 | 38292 | 38579 |
| YP_009324555.1 | NC_031938_p32 | hypothetical protein | phrog_9620 | unknown function | unknown function | 1 | 27173 | 27388 |
| YP_009324554.1 | NC_031938_p31 | hypothetical protein | phrog_4932 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 26702 | 27085 |
| YP_009324534.1 | NC_031938_p11 | hypothetical protein | phrog_12056 | unknown function | unknown function | 1 | 10804 | 13317 |
| YP_009324542.1 | NC_031938_p19 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 20285 | 20539 |
| YP_009324562.1 | NC_031938_p39 | hypothetical protein | phrog_1365 | unknown function | unknown function | 1 | 31543 | 31896 |
| YP_009324573.1 | NC_031938_p50 | hypothetical protein | phrog_13638 | unknown function | unknown function | 1 | 37360 | 37587 |
| YP_009324549.1 | NC_031938_p26 | hypothetical protein | phrog_2113 | unknown function | unknown function | 1 | 24593 | 25075 |
| YP_009324579.1 | NC_031938_p56 | structural protein | phrog_8193 | major head protein | head and packaging | 1 | 39619 | 40236 |
| YP_009324532.1 | NC_031938_p9 | hypothetical protein | phrog_12387 | unknown function | unknown function | 1 | 8818 | 10581 |
| YP_009324556.1 | NC_031938_p33 | hypothetical protein | phrog_14351 | unknown function | unknown function | 1 | 27391 | 28770 |
| YP_009324541.1 | NC_031938_p18 | hypothetical protein | phrog_13143 | unknown function | unknown function | 1 | 19361 | 19945 |
| YP_009324536.1 | NC_031938_p13 | hypothetical protein | phrog_13374 | unknown function | unknown function | 1 | 14559 | 16796 |
| YP_009324572.1 | NC_031938_p49 | hypothetical protein | phrog_13650 | unknown function | unknown function | 1 | 36949 | 37296 |
| YP_009324559.1 | NC_031938_p36 | hypothetical protein | phrog_8580 | unknown function | unknown function | 1 | 29302 | 29532 |
| YP_009324560.1 | NC_031938_p37 | DNA polymerase III epsilon subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29744 | 30478 |
| YP_009324528.1 | NC_031938_p5 | hypothetical protein | phrog_8145 | unknown function | unknown function | 1 | 3739 | 4329 |
| YP_009324575.1 | NC_031938_p52 | hypothetical protein | phrog_13207 | unknown function | unknown function | 1 | 37946 | 38305 |
| YP_009324568.1 | NC_031938_p45 | hypothetical protein | phrog_11000 | unknown function | unknown function | 1 | 34109 | 34333 |