Genomic map of Flavobacterium phage Fpv6 (NC_031938)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031938
Definition
Flavobacterium phage Fpv6, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
42820
Host Name
Flavobacterium psychrophilum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
31.98
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009324530.1 NC_031938_p7 structural protein phrog_8914 virion structural protein head and packaging 1 4616 5368
YP_009324548.1 NC_031938_p25 hypothetical protein phrog_13145 unknown function unknown function 1 24316 24696
YP_009324540.1 NC_031938_p17 hypothetical protein phrog_1259 baseplate hub subunit and tail lysozyme tail 1 18835 19371
YP_009324567.1 NC_031938_p44 hypothetical protein phrog_12515 unknown function unknown function 1 33800 34105
YP_009324581.1 NC_031938_p58 hypothetical protein phrog_14563 unknown function unknown function 1 42147 42737
YP_009324547.1 NC_031938_p24 hypothetical protein phrog_4632 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 23814 24353
YP_009324527.1 NC_031938_p4 hypothetical protein phrog_6195 tail protein tail 1 3330 3764
YP_009324543.1 NC_031938_p20 hypothetical protein phrog_14584 unknown function unknown function 1 20650 21225
YP_009324533.1 NC_031938_p10 hypothetical protein phrog_13115 unknown function unknown function 1 10578 10811
YP_009324525.1 NC_031938_p2 structural protein phrog_7231 virion structural protein head and packaging 1 1079 2128
YP_009324571.1 NC_031938_p48 hypothetical protein phrog_452 endonuclease DNA, RNA and nucleotide metabolism 1 36216 36599
YP_009324531.1 NC_031938_p8 structural protein phrog_14476 virion structural protein head and packaging 1 5504 8815
YP_009324566.1 NC_031938_p43 hypothetical protein phrog_13210 unknown function unknown function 1 33192 33803
YP_009324539.1 NC_031938_p16 hypothetical protein phrog_14595 unknown function unknown function 1 18189 18842
YP_009324570.1 NC_031938_p47 terminase large subunit phrog_2 terminase large subunit head and packaging 1 34987 36207
YP_009324563.1 NC_031938_p40 conjugal transfer protein phrog_799 DNA methyltransferase other 1 31877 32308
YP_009324545.1 NC_031938_p22 hypothetical protein phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 22009 22806
YP_009324553.1 NC_031938_p30 hypothetical protein phrog_14663 unknown function unknown function 1 26392 26697
YP_009324565.1 NC_031938_p42 hypothetical protein phrog_14426 unknown function unknown function 1 32842 33189
YP_009324544.1 NC_031938_p21 hypothetical protein phrog_4763 unknown function unknown function 1 21295 22008
YP_009324526.1 NC_031938_p3 hypothetical protein phrog_8189 unknown function unknown function 1 2201 3337
YP_009324550.1 NC_031938_p27 hypothetical protein phrog_5443 unknown function unknown function 1 25072 25356
YP_009324524.1 NC_031938_p1 hypothetical protein phrog_7970 virion structural protein head and packaging 1 78 1052
YP_009324569.1 NC_031938_p46 DNA packaging protein phrog_606 terminase small subunit head and packaging 1 34498 34983
YP_009324561.1 NC_031938_p38 hypothetical protein phrog_116 DNA methyltransferase other 1 30479 31546
YP_009324557.1 NC_031938_p34 hypothetical protein phrog_13960 unknown function unknown function 1 28789 29106
YP_009324577.1 NC_031938_p54 hypothetical protein phrog_9957 unknown function unknown function 1 38569 38940
YP_009324537.1 NC_031938_p14 hypothetical protein phrog_12180 unknown function unknown function 1 16800 17756
YP_009324552.1 NC_031938_p29 hypothetical protein phrog_7108 unknown function unknown function 1 26034 26504
YP_009324546.1 NC_031938_p23 hypothetical protein phrog_14628 unknown function unknown function 1 22808 23848
YP_009324578.1 NC_031938_p55 hypothetical protein phrog_13579 unknown function unknown function 1 39014 39463
YP_009324538.1 NC_031938_p15 hypothetical protein phrog_14274 unknown function unknown function 1 17773 18204
YP_009324580.1 NC_031938_p57 hypothetical protein phrog_7376 portal protein head and packaging 1 40413 42128
YP_009324529.1 NC_031938_p6 hypothetical protein phrog_13297 unknown function unknown function 1 4349 4612
YP_009324564.1 NC_031938_p41 hypothetical protein phrog_14413 unknown function unknown function 1 32499 32996
YP_009324551.1 NC_031938_p28 hypothetical protein phrog_9513 unknown function unknown function 1 25382 26002
YP_009324535.1 NC_031938_p12 hypothetical protein phrog_12000 unknown function unknown function 1 13350 14546
YP_009324574.1 NC_031938_p51 hypothetical protein phrog_14160 unknown function unknown function 1 37569 37829
YP_009324558.1 NC_031938_p35 hypothetical protein phrog_14020 unknown function unknown function 1 29106 29354
YP_009324576.1 NC_031938_p53 hypothetical protein phrog_13886 unknown function unknown function 1 38292 38579
YP_009324555.1 NC_031938_p32 hypothetical protein phrog_9620 unknown function unknown function 1 27173 27388
YP_009324554.1 NC_031938_p31 hypothetical protein phrog_4932 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 26702 27085
YP_009324534.1 NC_031938_p11 hypothetical protein phrog_12056 unknown function unknown function 1 10804 13317
YP_009324542.1 NC_031938_p19 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 20285 20539
YP_009324562.1 NC_031938_p39 hypothetical protein phrog_1365 unknown function unknown function 1 31543 31896
YP_009324573.1 NC_031938_p50 hypothetical protein phrog_13638 unknown function unknown function 1 37360 37587
YP_009324549.1 NC_031938_p26 hypothetical protein phrog_2113 unknown function unknown function 1 24593 25075
YP_009324579.1 NC_031938_p56 structural protein phrog_8193 major head protein head and packaging 1 39619 40236
YP_009324532.1 NC_031938_p9 hypothetical protein phrog_12387 unknown function unknown function 1 8818 10581
YP_009324556.1 NC_031938_p33 hypothetical protein phrog_14351 unknown function unknown function 1 27391 28770
YP_009324541.1 NC_031938_p18 hypothetical protein phrog_13143 unknown function unknown function 1 19361 19945
YP_009324536.1 NC_031938_p13 hypothetical protein phrog_13374 unknown function unknown function 1 14559 16796
YP_009324572.1 NC_031938_p49 hypothetical protein phrog_13650 unknown function unknown function 1 36949 37296
YP_009324559.1 NC_031938_p36 hypothetical protein phrog_8580 unknown function unknown function 1 29302 29532
YP_009324560.1 NC_031938_p37 DNA polymerase III epsilon subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29744 30478
YP_009324528.1 NC_031938_p5 hypothetical protein phrog_8145 unknown function unknown function 1 3739 4329
YP_009324575.1 NC_031938_p52 hypothetical protein phrog_13207 unknown function unknown function 1 37946 38305
YP_009324568.1 NC_031938_p45 hypothetical protein phrog_11000 unknown function unknown function 1 34109 34333