| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031939 |
Definition |
Salmonella phage BPS15Q2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Felixounavirus; Salmonella virus BPS15Q2. |
DB of origin |
REFSEQ |
Length |
89817 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
130 |
%GC |
38.85 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009324658.1 | NC_031939_p77 | exodeoxyribonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 57761 | 58807 |
| YP_009324688.1 | NC_031939_p107 | hypothetical protein | phrog_2267 | unknown function | unknown function | 1 | 79560 | 80024 |
| YP_009324709.1 | NC_031939_p128 | hypothetical protein | phrog_4725 | unknown function | unknown function | 1 | 88170 | 88700 |
| YP_009324702.1 | NC_031939_p121 | hypothetical protein | phrog_4375 | unknown function | unknown function | 1 | 85096 | 85428 |
| YP_009324685.1 | NC_031939_p104 | rIIB protein | phrog_609 | RIIB lysis inhibitor | lysis | 1 | 77118 | 78227 |
| YP_009324638.1 | NC_031939_p57 | hypothetical protein | phrog_4332 | unknown function | unknown function | -1 | 43725 | 44108 |
| YP_009324707.1 | NC_031939_p126 | hypothetical protein | phrog_4640 | unknown function | unknown function | 1 | 87283 | 87516 |
| YP_009324650.1 | NC_031939_p69 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 49698 | 51881 |
| YP_009324670.1 | NC_031939_p89 | anaerobic nucleoside diphosphate reductase | phrog_487 | NrdD-like anaerobic ribonucleotide reductase large subunit | moron, auxiliary metabolic gene and host takeover | 1 | 65563 | 67707 |
| YP_009324599.1 | NC_031939_p18 | endonuclease VII | phrog_2255 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 13728 | 14141 |
| YP_009324600.1 | NC_031939_p19 | hypothetical protein | phrog_2143 | unknown function | unknown function | 1 | 14569 | 15126 |
| YP_009324651.1 | NC_031939_p70 | hypothetical protein | phrog_4039 | unknown function | unknown function | 1 | 52138 | 52560 |
| YP_009324613.1 | NC_031939_p32 | hypothetical protein | phrog_4082 | unknown function | unknown function | 1 | 25059 | 25658 |
| YP_009324618.1 | NC_031939_p37 | tail length tape-measure protein | phrog_4036 | tail length tape measure protein | tail | 1 | 28187 | 30415 |
| YP_009324582.1 | NC_031939_p1 | hypothetical protein | phrog_4330 | unknown function | unknown function | -1 | 1233 | 1781 |
| YP_009324647.1 | NC_031939_p66 | hypothetical protein | phrog_5180 | unknown function | unknown function | -1 | 48109 | 48318 |
| YP_009324586.1 | NC_031939_p5 | hypothetical protein | phrog_4459 | unknown function | unknown function | -1 | 3114 | 3332 |
| YP_009324587.1 | NC_031939_p6 | hypothetical protein | phrog_5380 | unknown function | unknown function | -1 | 3329 | 3874 |
| YP_009324631.1 | NC_031939_p50 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 40625 | 41524 |
| YP_009324584.1 | NC_031939_p3 | hypothetical protein | phrog_4457 | unknown function | unknown function | -1 | 2313 | 2537 |
| YP_009324689.1 | NC_031939_p108 | i-spanin | phrog_1152 | Rz-like spanin | lysis | 1 | 80077 | 80424 |
| YP_009324605.1 | NC_031939_p24 | hypothetical protein | phrog_3977 | unknown function | unknown function | 1 | 20015 | 20515 |
| YP_009324668.1 | NC_031939_p87 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 65073 | 65315 |
| YP_009324652.1 | NC_031939_p71 | minor tail protein | phrog_4251 | minor tail protein | tail | 1 | 52562 | 53374 |
| YP_009324699.1 | NC_031939_p118 | hypothetical protein | phrog_5089 | unknown function | unknown function | 1 | 83823 | 84113 |
| YP_009324654.1 | NC_031939_p73 | hypothetical protein | phrog_4469 | unknown function | unknown function | 1 | 54194 | 54388 |
| YP_009324635.1 | NC_031939_p54 | hypothetical protein | phrog_4116 | unknown function | unknown function | -1 | 42858 | 43217 |
| YP_009324682.1 | NC_031939_p101 | hypothetical protein | phrog_4262 | unknown function | unknown function | 1 | 74150 | 74485 |
| YP_009324698.1 | NC_031939_p117 | hypothetical protein | phrog_4495 | unknown function | unknown function | 1 | 83353 | 83733 |
| YP_009324604.1 | NC_031939_p23 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 18549 | 20015 |
| YP_009324705.1 | NC_031939_p124 | hypothetical protein | phrog_3623 | unknown function | unknown function | 1 | 86383 | 86586 |
| YP_009324640.1 | NC_031939_p59 | hypothetical protein | phrog_4652 | unknown function | unknown function | -1 | 44954 | 45541 |
| YP_009324711.1 | NC_031939_p130 | hypothetical protein | phrog_4559 | unknown function | unknown function | 1 | 89110 | 89358 |
| YP_009324648.1 | NC_031939_p67 | DNA polymerase | phrog_6375 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 48380 | 48934 |
| YP_009324694.1 | NC_031939_p113 | hypothetical protein | phrog_2210 | unknown function | unknown function | 1 | 81377 | 81577 |
| YP_009324616.1 | NC_031939_p35 | tape measure chaperone | phrog_1613 | tail assembly chaperone | tail | 1 | 27547 | 27945 |
| YP_009324692.1 | NC_031939_p111 | hypothetical protein | phrog_4453 | unknown function | unknown function | 1 | 80856 | 81182 |
| YP_009324690.2 | NC_031939_p109 | o-spanin | phrog_4180 | unknown function | unknown function | 1 | 80318 | 80587 |
| YP_009324641.1 | NC_031939_p60 | ATP-dependent DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 45990 | 47093 |
| YP_009324656.1 | NC_031939_p75 | hypothetical protein | phrog_4424 | unknown function | unknown function | 1 | 56619 | 56768 |
| YP_009324646.1 | NC_031939_p65 | hypothetical protein | phrog_4230 | unknown function | unknown function | -1 | 47894 | 48112 |
| YP_009324636.1 | NC_031939_p55 | transcriptional regulator | phrog_1373 | transcriptional regulator | transcription regulation | -1 | 43219 | 43518 |
| YP_009324700.1 | NC_031939_p119 | hypothetical protein | phrog_4190 | unknown function | unknown function | 1 | 84201 | 84713 |
| YP_009324623.1 | NC_031939_p42 | baseplate component | phrog_120 | baseplate wedge subunit | tail | 1 | 33153 | 33572 |
| YP_009324617.1 | NC_031939_p36 | tape measure chaperone | phrog_4963 | tail assembly chaperone | tail | 1 | 27948 | 28187 |
| YP_009324662.1 | NC_031939_p81 | hypothetical protein | phrog_2144 | MazG-like pyrophosphatase | other | 1 | 60025 | 60780 |
| YP_009324655.1 | NC_031939_p74 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 54381 | 56366 |
| YP_009324684.1 | NC_031939_p103 | rIIA protein | phrog_612 | RIIA lysis inhibitor | lysis | 1 | 74672 | 77038 |
| YP_009324693.1 | NC_031939_p112 | hypothetical protein | phrog_6082 | unknown function | unknown function | 1 | 81157 | 81384 |
| YP_009324626.1 | NC_031939_p45 | hypothetical protein | phrog_4141 | unknown function | unknown function | 1 | 35901 | 36203 |
| YP_009324672.1 | NC_031939_p91 | hypothetical protein | phrog_1774 | unknown function | unknown function | 1 | 68451 | 68750 |
| YP_009324589.1 | NC_031939_p8 | hypothetical protein | phrog_4040 | unknown function | unknown function | -1 | 4528 | 4872 |
| YP_009324614.1 | NC_031939_p33 | structural protein | phrog_205 | tail sheath | tail | 1 | 25659 | 27011 |
| YP_009324608.1 | NC_031939_p27 | structural protein | phrog_4146 | tail protease | other | 1 | 22217 | 22594 |
| YP_009324632.1 | NC_031939_p51 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | -1 | 41526 | 42071 |
| YP_009324611.1 | NC_031939_p30 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | 1 | 24204 | 24686 |
| YP_009324697.1 | NC_031939_p116 | hypothetical protein | phrog_5293 | unknown function | unknown function | 1 | 83059 | 83265 |
| YP_009324629.1 | NC_031939_p48 | hypothetical protein | phrog_402 | unknown function | unknown function | 1 | 40104 | 40220 |
| YP_009324666.1 | NC_031939_p85 | hypothetical protein | phrog_2652 | unknown function | unknown function | 1 | 63836 | 64003 |
| YP_009324704.1 | NC_031939_p123 | hypothetical protein | phrog_4327 | unknown function | unknown function | 1 | 85875 | 86279 |
| YP_009324588.1 | NC_031939_p7 | hypothetical protein | phrog_4109 | unknown function | unknown function | -1 | 3947 | 4528 |
| YP_009324642.1 | NC_031939_p61 | hypothetical protein | phrog_5768 | unknown function | unknown function | -1 | 47068 | 47286 |
| YP_009324667.1 | NC_031939_p86 | ribonucleoside triphosphate reductase beta subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 64000 | 65073 |
| YP_009324602.1 | NC_031939_p21 | hypothetical protein | phrog_4397 | unknown function | unknown function | 1 | 16709 | 16909 |
| YP_009324591.1 | NC_031939_p10 | hypothetical protein | phrog_4348 | unknown function | unknown function | -1 | 5158 | 5547 |
| YP_009324703.1 | NC_031939_p122 | hypothetical protein | phrog_3436 | unknown function | unknown function | 1 | 85515 | 85787 |
| YP_009324695.1 | NC_031939_p114 | phosphatase | phrog_335 | phosphatase | other | 1 | 81578 | 82363 |
| YP_009324607.1 | NC_031939_p26 | head maturation protease | phrog_53 | head maturation protease | head and packaging | 1 | 20859 | 22205 |
| YP_009324598.1 | NC_031939_p17 | hypothetical protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 9416 | 10831 |
| YP_009324708.1 | NC_031939_p127 | hypothetical protein | phrog_4318 | unknown function | unknown function | 1 | 87609 | 87950 |
| YP_009324609.1 | NC_031939_p28 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 22628 | 23734 |
| YP_009324673.1 | NC_031939_p92 | anaerobic nucleoside-triphosphate reductase subunit | phrog_626 | anaerobic ribonucleotide reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 68760 | 69245 |
| YP_009324710.1 | NC_031939_p129 | hypothetical protein | phrog_7022 | unknown function | unknown function | 1 | 88767 | 89030 |
| YP_009324597.1 | NC_031939_p16 | hypothetical protein | phrog_4114 | unknown function | unknown function | 1 | 8963 | 9334 |
| YP_009324687.1 | NC_031939_p106 | PseT | phrog_3970 | polynucleotide kinase | other | 1 | 78854 | 79549 |
| YP_009324686.1 | NC_031939_p105 | hypothetical protein | phrog_600 | unknown function | unknown function | 1 | 78328 | 78876 |
| YP_009324645.1 | NC_031939_p64 | hypothetical protein | phrog_2381 | unknown function | unknown function | -1 | 47721 | 47867 |
| YP_009324653.1 | NC_031939_p72 | deoxynucleotide monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 53436 | 54179 |
| YP_009324674.1 | NC_031939_p93 | hypothetical protein | phrog_5082 | unknown function | unknown function | 1 | 69208 | 69477 |
| YP_009324619.1 | NC_031939_p38 | hypothetical protein | phrog_3721 | unknown function | unknown function | 1 | 30415 | 31212 |
| YP_009324593.1 | NC_031939_p12 | lysozyme | phrog_7 | endolysin | lysis | -1 | 5989 | 6453 |
| YP_009324669.1 | NC_031939_p88 | membrane protein | phrog_4532 | unknown function | unknown function | 1 | 65308 | 65514 |
| YP_009324627.1 | NC_031939_p46 | tail fiber protein | phrog_2097 | tail fiber protein | tail | 1 | 36206 | 37372 |
| YP_009324596.1 | NC_031939_p15 | hypothetical protein | phrog_4034 | unknown function | unknown function | -1 | 7753 | 8343 |
| YP_009324615.1 | NC_031939_p34 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | 1 | 27027 | 27473 |
| YP_009324696.1 | NC_031939_p115 | hypothetical protein | phrog_15633 | unknown function | unknown function | 1 | 82871 | 83059 |
| YP_009324630.1 | NC_031939_p49 | holin | phrog_4038 | unknown function | unknown function | 1 | 40217 | 40588 |
| YP_009324660.1 | NC_031939_p79 | NAD synthetase | phrog_447 | NAD synthetase | other | 1 | 59282 | 59779 |
| YP_009324639.1 | NC_031939_p58 | hypothetical protein | phrog_5926 | unknown function | unknown function | -1 | 44511 | 44951 |
| YP_009324659.1 | NC_031939_p78 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 58947 | 59285 |
| YP_009324612.1 | NC_031939_p31 | hypothetical protein | phrog_2874 | unknown function | unknown function | 1 | 24683 | 25084 |
| YP_009324595.1 | NC_031939_p14 | hypothetical protein | phrog_4463 | unknown function | unknown function | -1 | 7334 | 7705 |
| YP_009324643.1 | NC_031939_p62 | hypothetical protein | phrog_4427 | unknown function | unknown function | -1 | 47283 | 47489 |
| YP_009324677.1 | NC_031939_p96 | hypothetical protein | phrog_3500 | unknown function | unknown function | 1 | 70121 | 70636 |
| YP_009324679.1 | NC_031939_p98 | ribose-phosphate pyrophosphokinase | phrog_619 | ribose-phosphate pyrophosphokinase | other | 1 | 70919 | 71800 |
| YP_009324594.1 | NC_031939_p13 | tail protein | phrog_3995 | tail protein | tail | -1 | 6453 | 7337 |
| YP_009324610.1 | NC_031939_p29 | hypothetical protein | phrog_1732 | unknown function | unknown function | 1 | 23755 | 24204 |
| YP_009324678.1 | NC_031939_p97 | hypothetical protein | phrog_4726 | unknown function | unknown function | 1 | 70629 | 70907 |
| YP_009324603.1 | NC_031939_p22 | terminase large subunit | phrog_979 | terminase large subunit | head and packaging | 1 | 16931 | 18532 |
| YP_009324625.1 | NC_031939_p44 | hypothetical protein | phrog_4017 | baseplate protein | tail | 1 | 35044 | 35901 |
| YP_009324661.1 | NC_031939_p80 | hypothetical protein | phrog_4442 | unknown function | unknown function | 1 | 59801 | 60049 |
| YP_009324585.1 | NC_031939_p4 | membrane protein | phrog_4343 | unknown function | unknown function | -1 | 2614 | 3117 |
| YP_009324592.1 | NC_031939_p11 | hypothetical protein | phrog_4266 | unknown function | unknown function | -1 | 5540 | 5938 |
| YP_009324664.1 | NC_031939_p83 | hypothetical protein | phrog_3358 | unknown function | unknown function | 1 | 61077 | 61409 |
| YP_009324701.1 | NC_031939_p120 | hypothetical protein | phrog_4401 | unknown function | unknown function | 1 | 84806 | 85102 |
| YP_009324665.1 | NC_031939_p84 | ribonucleoside triphosphate reductase alpha chain | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 61456 | 63690 |
| YP_009324620.1 | NC_031939_p39 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | 1 | 31212 | 31553 |
| YP_009324657.1 | NC_031939_p76 | hypothetical protein | phrog_3877 | unknown function | unknown function | 1 | 56841 | 57698 |
| YP_009324624.1 | NC_031939_p43 | baseplate component | phrog_6 | baseplate wedge subunit | tail | 1 | 33572 | 35041 |
| YP_009324680.1 | NC_031939_p99 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 71809 | 72300 |
| YP_009324675.1 | NC_031939_p94 | hypothetical protein | phrog_4425 | unknown function | unknown function | 1 | 69489 | 69746 |
| YP_009324621.1 | NC_031939_p40 | hypothetical protein | phrog_196 | baseplate hub | tail | 1 | 31553 | 32530 |
| YP_009324601.1 | NC_031939_p20 | hypothetical protein | phrog_2114 | unknown function | unknown function | 1 | 15578 | 16312 |
| YP_009324583.1 | NC_031939_p2 | hypothetical protein | phrog_4713 | unknown function | unknown function | -1 | 1795 | 2259 |
| YP_009324590.1 | NC_031939_p9 | hypothetical protein | phrog_4385 | unknown function | unknown function | -1 | 4865 | 5158 |
| YP_009324681.1 | NC_031939_p100 | nicotinamide phosphoribosyl transferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | 1 | 72315 | 74096 |
| YP_009324683.1 | NC_031939_p102 | membrane protein | phrog_3931 | unknown function | unknown function | 1 | 74467 | 74643 |
| YP_009324606.1 | NC_031939_p25 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 20515 | 20847 |
| YP_009324634.1 | NC_031939_p53 | hypothetical protein | phrog_4422 | unknown function | unknown function | -1 | 42329 | 42844 |
| YP_009324691.1 | NC_031939_p110 | hypothetical protein | phrog_4391 | unknown function | unknown function | 1 | 80584 | 80853 |
| YP_009324706.1 | NC_031939_p125 | hypothetical protein | phrog_3303 | unknown function | unknown function | 1 | 86674 | 87216 |
| YP_009324644.1 | NC_031939_p63 | hypothetical protein | phrog_902 | unknown function | unknown function | -1 | 47500 | 47736 |
| YP_009324663.1 | NC_031939_p82 | hypothetical protein | phrog_4007 | unknown function | unknown function | 1 | 60761 | 61084 |
| YP_009324676.1 | NC_031939_p95 | hypothetical protein | phrog_4462 | unknown function | unknown function | 1 | 69749 | 70069 |
| YP_009324671.1 | NC_031939_p90 | hypothetical protein | phrog_4382 | unknown function | unknown function | 1 | 68059 | 68454 |
| YP_009324649.1 | NC_031939_p68 | endonuclease | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 49148 | 49630 |
| YP_009324622.1 | NC_031939_p41 | baseplate protein | phrog_11 | baseplate spike | tail | 1 | 32530 | 33153 |
| YP_009324633.1 | NC_031939_p52 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42068 | 42241 |
| YP_009324628.1 | NC_031939_p47 | tail fiber protein | phrog_4277 | tail fiber protein | tail | 1 | 37421 | 39943 |
| YP_009324637.1 | NC_031939_p56 | hypothetical protein | phrog_4473 | unknown function | unknown function | -1 | 43511 | 43723 |