Genomic map of Escherichia phage vB_EcoP_GA2A (NC_031943)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031943
Definition
Escherichia phage vB_EcoP_GA2A, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Kayfunavirus; Escherichia virus GA2A.
DB of origin
REFSEQ
Length
40470
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
51.09
Number of singletons
4
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009324964.1 NC_031943_p30 hypothetical protein phrog_1334 unknown function unknown function 1 16677 16886
YP_009324935.1 NC_031943_p1 hypothetical protein phrog_20418 unknown function unknown function 1 898 1074
YP_009324953.1 NC_031943_p19 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 9093 9788
YP_009324959.1 NC_031943_p25 hypothetical protein phrog_13039 unknown function unknown function 1 12968 13132
YP_009324942.1 NC_031943_p8 DNA-directed RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 2723 5404
YP_009324974.1 NC_031943_p40 capsid and scaffold protein phrog_267 major head protein head and packaging 1 22434 23480
YP_009324984.1 NC_031943_p50 hypothetical protein singleton unknown function unknown function 1 34779 36788
YP_009324948.1 NC_031943_p14 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 6742 7821
YP_009324952.1 NC_031943_p18 hypothetical protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 8881 9045
YP_009324962.1 NC_031943_p28 hypothetical protein phrog_20928 unknown function unknown function 1 16232 16396
YP_009324983.1 NC_031943_p49 internal (core) protein phrog_342 internal virion protein with endolysin domain head and packaging 1 30826 34713
YP_009324949.1 NC_031943_p15 hypothetical protein phrog_36761 unknown function unknown function 1 7818 7997
YP_009324986.1 NC_031943_p52 DNA packaging protein A phrog_1351 terminase small subunit head and packaging 1 36988 37251
YP_009324946.1 NC_031943_p12 hypothetical protein phrog_4383 unknown function unknown function 1 6254 6433
YP_009324975.1 NC_031943_p41 hypothetical protein phrog_7473 unknown function unknown function 1 23492 23746
YP_009324977.1 NC_031943_p43 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 24370 24597
YP_009324965.1 NC_031943_p31 hypothetical protein phrog_2251 unknown function unknown function 1 16883 17101
YP_009324938.1 NC_031943_p4 hypothetical protein singleton unknown function unknown function 1 1814 1939
YP_009324989.1 NC_031943_p55 hypothetical protein singleton unknown function unknown function 1 39575 39691
YP_009324961.1 NC_031943_p27 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 14061 16232
YP_009324937.1 NC_031943_p3 hypothetical protein phrog_5058 unknown function unknown function 1 1656 1811
YP_009324973.1 NC_031943_p39 capsid and scaffold protein phrog_1052 head assembly head and packaging 1 21423 22307
YP_009324967.1 NC_031943_p33 hypothetical protein phrog_1447 unknown function unknown function 1 18178 18450
YP_009324955.1 NC_031943_p21 hypothetical protein phrog_15211 unknown function unknown function 1 10243 10467
YP_009324987.1 NC_031943_p53 hypothetical protein phrog_1327 Rz-like spanin lysis 1 37352 37786
YP_009324940.1 NC_031943_p6 hypothetical protein phrog_2385 unknown function unknown function 1 2102 2299
YP_009324988.1 NC_031943_p54 DNA packaging protein B phrog_38 terminase large subunit head and packaging 1 37776 39545
YP_009324980.1 NC_031943_p46 internal (core) protein phrog_805 internal virion protein head and packaging 1 27508 28095
YP_009324941.1 NC_031943_p7 hypothetical protein phrog_7066 unknown function unknown function 1 2299 2625
YP_009324981.1 NC_031943_p47 internal (core) protein phrog_1339 internal virion protein head and packaging 1 28107 30389
YP_009324936.1 NC_031943_p2 hypothetical protein phrog_11084 unknown function unknown function 1 1138 1662
YP_009324979.1 NC_031943_p45 internal (core) protein phrog_308 internal virion protein head and packaging 1 27053 27523
YP_009324943.1 NC_031943_p9 hypothetical protein phrog_8082 unknown function unknown function 1 5417 5617
YP_009324957.1 NC_031943_p23 hypothetical protein phrog_1950 unknown function unknown function 1 10939 11154
YP_009324939.1 NC_031943_p5 hypothetical protein phrog_36394 unknown function unknown function 1 1940 2080
YP_009324944.1 NC_031943_p10 hypothetical protein singleton unknown function unknown function 1 5614 5691
YP_009324947.1 NC_031943_p13 hypothetical protein phrog_2949 dGTPase inhibitor; target for F exclusion other 1 6437 6724
YP_009324968.1 NC_031943_p34 hypothetical protein phrog_1391 unknown function unknown function 1 18465 18689
YP_009324985.1 NC_031943_p51 class II holin phrog_920 holin lysis 1 36797 36991
YP_009324960.1 NC_031943_p26 hypothetical protein phrog_116 DNA methyltransferase other 1 13196 14068
YP_009324978.1 NC_031943_p44 tail tubular protein B phrog_457 tail protein tail 1 24609 26978
YP_009324976.1 NC_031943_p42 tail tubular protein A phrog_446 tail protein tail 1 23804 24370
YP_009324982.1 NC_031943_p48 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 30395 30844
YP_009324990.1 NC_031943_p56 hypothetical protein phrog_2193 unknown function unknown function 1 39843 40001
YP_009324969.1 NC_031943_p35 hypothetical protein phrog_2746 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 18730 19098
YP_009324950.1 NC_031943_p16 hypothetical protein phrog_1777 unknown function unknown function 1 8106 8366
YP_009324970.1 NC_031943_p36 hypothetical protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 19091 19339
YP_009324963.1 NC_031943_p29 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 16396 16680
YP_009324954.1 NC_031943_p20 hypothetical protein phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 9824 10243
YP_009324951.1 NC_031943_p17 hypothetical protein phrog_4943 unknown function unknown function 1 8359 8802
YP_009324956.1 NC_031943_p22 N-acetylmuramoyl-L-alanine amidase phrog_822 amidase lysis 1 10457 10915
YP_009324971.1 NC_031943_p37 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 19336 19746
YP_009324966.1 NC_031943_p32 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 17101 17967
YP_009324958.1 NC_031943_p24 primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 11223 12923
YP_009324945.1 NC_031943_p11 hypothetical protein phrog_8103 unknown function unknown function 1 5696 6169
YP_009324972.1 NC_031943_p38 head-to-tail joining protein phrog_449 head-tail adaptor connector 1 19739 21307