| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031945 |
Definition |
Flavobacterium phage Fpv11, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
42696 |
Host Name |
Flavobacterium psychrophilum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
32.01 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009325269.1 | NC_031945_p58 | hypothetical protein | phrog_14563 | unknown function | unknown function | 1 | 42087 | 42677 |
| YP_009325255.1 | NC_031945_p44 | hypothetical protein | phrog_12515 | unknown function | unknown function | 1 | 33734 | 34039 |
| YP_009325257.1 | NC_031945_p46 | DNA packaging protein | phrog_606 | terminase small subunit | head and packaging | 1 | 34432 | 34917 |
| YP_009325267.1 | NC_031945_p56 | structural protein | phrog_8193 | major head protein | head and packaging | 1 | 39559 | 40176 |
| YP_009325219.1 | NC_031945_p8 | structural protein | phrog_14476 | virion structural protein | head and packaging | 1 | 5438 | 8749 |
| YP_009325254.1 | NC_031945_p43 | hypothetical protein | phrog_13210 | unknown function | unknown function | 1 | 33126 | 33737 |
| YP_009325226.1 | NC_031945_p15 | hypothetical protein | phrog_14274 | unknown function | unknown function | 1 | 17707 | 18138 |
| YP_009325256.1 | NC_031945_p45 | hypothetical protein | phrog_11000 | unknown function | unknown function | 1 | 34043 | 34267 |
| YP_009325237.1 | NC_031945_p26 | hypothetical protein | phrog_2113 | unknown function | unknown function | 1 | 24527 | 25009 |
| YP_009325250.1 | NC_031945_p39 | hypothetical protein | phrog_1365 | unknown function | unknown function | 1 | 31477 | 31830 |
| YP_009325242.1 | NC_031945_p31 | hypothetical protein | phrog_4932 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 26636 | 27019 |
| YP_009325216.1 | NC_031945_p5 | hypothetical protein | phrog_8145 | unknown function | unknown function | 1 | 3673 | 4263 |
| YP_009325232.1 | NC_031945_p21 | hypothetical protein | phrog_4763 | unknown function | unknown function | 1 | 21229 | 21942 |
| YP_009325266.1 | NC_031945_p55 | hypothetical protein | phrog_13579 | unknown function | unknown function | 1 | 38954 | 39403 |
| YP_009325258.1 | NC_031945_p47 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 34921 | 36147 |
| YP_009325214.1 | NC_031945_p3 | hypothetical protein | phrog_8189 | unknown function | unknown function | 1 | 2135 | 3271 |
| YP_009325228.1 | NC_031945_p17 | hypothetical protein | phrog_1259 | baseplate hub subunit and tail lysozyme | tail | 1 | 18769 | 19305 |
| YP_009325229.1 | NC_031945_p18 | hypothetical protein | phrog_13143 | unknown function | unknown function | 1 | 19295 | 19879 |
| YP_009325244.1 | NC_031945_p33 | hypothetical protein | phrog_14351 | unknown function | unknown function | 1 | 27325 | 28704 |
| YP_009325265.1 | NC_031945_p54 | hypothetical protein | phrog_9957 | unknown function | unknown function | 1 | 38509 | 38880 |
| YP_009325252.1 | NC_031945_p41 | hypothetical protein | phrog_14413 | unknown function | unknown function | 1 | 32433 | 32930 |
| YP_009325268.1 | NC_031945_p57 | hypothetical protein | phrog_7376 | portal protein | head and packaging | 1 | 40353 | 42068 |
| YP_009325262.1 | NC_031945_p51 | hypothetical protein | phrog_14160 | unknown function | unknown function | 1 | 37509 | 37769 |
| YP_009325227.1 | NC_031945_p16 | hypothetical protein | phrog_14595 | unknown function | unknown function | 1 | 18123 | 18776 |
| YP_009325215.1 | NC_031945_p4 | hypothetical protein | phrog_6195 | tail protein | tail | 1 | 3264 | 3698 |
| YP_009325247.1 | NC_031945_p36 | hypothetical protein | phrog_8580 | unknown function | unknown function | 1 | 29236 | 29466 |
| YP_009325223.1 | NC_031945_p12 | hypothetical protein | phrog_12000 | unknown function | unknown function | 1 | 13284 | 14480 |
| YP_009325245.1 | NC_031945_p34 | hypothetical protein | phrog_13960 | unknown function | unknown function | 1 | 28723 | 29040 |
| YP_009325221.1 | NC_031945_p10 | hypothetical protein | phrog_13115 | unknown function | unknown function | 1 | 10512 | 10745 |
| YP_009325234.1 | NC_031945_p23 | hypothetical protein | phrog_14628 | unknown function | unknown function | 1 | 22742 | 23782 |
| YP_009325230.1 | NC_031945_p19 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 20219 | 20473 |
| YP_009325220.1 | NC_031945_p9 | hypothetical protein | phrog_12387 | unknown function | unknown function | 1 | 8752 | 10515 |
| YP_009325264.1 | NC_031945_p53 | hypothetical protein | phrog_13886 | unknown function | unknown function | 1 | 38232 | 38519 |
| YP_009325259.1 | NC_031945_p48 | hypothetical protein | phrog_452 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 36156 | 36539 |
| YP_009325231.1 | NC_031945_p20 | hypothetical protein | phrog_14584 | unknown function | unknown function | 1 | 20584 | 21159 |
| YP_009325236.1 | NC_031945_p25 | hypothetical protein | phrog_13145 | unknown function | unknown function | 1 | 24250 | 24630 |
| YP_009325241.1 | NC_031945_p30 | hypothetical protein | phrog_14663 | unknown function | unknown function | 1 | 26326 | 26631 |
| YP_009325251.1 | NC_031945_p40 | conjugal transfer protein | phrog_799 | DNA methyltransferase | other | 1 | 31811 | 32242 |
| YP_009325233.1 | NC_031945_p22 | hypothetical protein | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 21943 | 22740 |
| YP_009325235.1 | NC_031945_p24 | hypothetical protein | phrog_4632 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 23748 | 24287 |
| YP_009325218.1 | NC_031945_p7 | structural protein | phrog_8914 | virion structural protein | head and packaging | 1 | 4550 | 5302 |
| YP_009325261.1 | NC_031945_p50 | hypothetical protein | phrog_13638 | unknown function | unknown function | 1 | 37300 | 37527 |
| YP_009325222.1 | NC_031945_p11 | hypothetical protein | phrog_12056 | unknown function | unknown function | 1 | 10738 | 13251 |
| YP_009325243.1 | NC_031945_p32 | hypothetical protein | phrog_9620 | unknown function | unknown function | 1 | 27107 | 27322 |
| YP_009325260.1 | NC_031945_p49 | hypothetical protein | phrog_13650 | unknown function | unknown function | 1 | 36889 | 37236 |
| YP_009325240.1 | NC_031945_p29 | hypothetical protein | phrog_7108 | unknown function | unknown function | 1 | 25968 | 26438 |
| YP_009325217.1 | NC_031945_p6 | hypothetical protein | phrog_13297 | unknown function | unknown function | 1 | 4283 | 4546 |
| YP_009325253.1 | NC_031945_p42 | hypothetical protein | phrog_14426 | unknown function | unknown function | 1 | 32776 | 33123 |
| YP_009325248.1 | NC_031945_p37 | DNA polymerase III epsilon subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29678 | 30412 |
| YP_009325238.1 | NC_031945_p27 | hypothetical protein | phrog_5443 | unknown function | unknown function | 1 | 25006 | 25290 |
| YP_009325239.1 | NC_031945_p28 | hypothetical protein | phrog_9513 | unknown function | unknown function | 1 | 25316 | 25936 |
| YP_009325224.1 | NC_031945_p13 | hypothetical protein | phrog_13374 | unknown function | unknown function | 1 | 14493 | 16730 |
| YP_009325263.1 | NC_031945_p52 | hypothetical protein | phrog_13207 | unknown function | unknown function | 1 | 37886 | 38245 |
| YP_009325249.1 | NC_031945_p38 | hypothetical protein | phrog_116 | DNA methyltransferase | other | 1 | 30413 | 31480 |
| YP_009325213.1 | NC_031945_p2 | structural protein | phrog_7231 | virion structural protein | head and packaging | 1 | 1013 | 2062 |
| YP_009325225.1 | NC_031945_p14 | hypothetical protein | phrog_12180 | unknown function | unknown function | 1 | 16734 | 17690 |
| YP_009325246.1 | NC_031945_p35 | hypothetical protein | phrog_14020 | unknown function | unknown function | 1 | 29040 | 29288 |
| YP_009325212.1 | NC_031945_p1 | hypothetical protein | phrog_7970 | virion structural protein | head and packaging | 1 | 12 | 986 |